RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 LPIN2Q92539 896 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
RFC4-210ENST00000449502 DIAPH3Q9NSV4 1193 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 ABCC12Q96J65 1359 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
RFC4-210ENST00000449502 RPS8P62241 208 aaKnown RBP11.76□□□□□ -0.53
RFC4-210ENST00000449502 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
RFC4-210ENST00000449502 DEFB132Q7Z7B7 95 aa11.76□□□□□ -0.53
RFC4-210ENST00000449502 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
RFC4-210ENST00000449502 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
RFC4-210ENST00000449502 FSD1Q9BTV5 496 aa11.76□□□□□ -0.53
RFC4-210ENST00000449502 C22orf23Q9BZE7 217 aa11.76□□□□□ -0.53
RFC4-210ENST00000449502 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
RFC4-210ENST00000449502 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
RFC4-210ENST00000449502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
RFC4-210ENST00000449502 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
RFC4-210ENST00000449502 SEC24BO95487 1268 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 MMP10P09238 476 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 MCCP23508 829 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 CHRNDQ07001 517 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 KIAA1211Q6ZU35 1233 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 HELBQ8NG08 1087 aaPredicted RBP11.75□□□□□ -0.53
RFC4-210ENST00000449502 ANKRD2Q9GZV1 360 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 PNPLA7Q6ZV29 1317 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 ZNF609O15014 1411 aa11.75□□□□□ -0.53
RFC4-210ENST00000449502 MYH14Q7Z406 1995 aaKnown RBP11.74□□□□□ -0.53
RFC4-210ENST00000449502 UQCRFS1P1P0C7P4 283 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 CHMLP26374 656 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 DDR1Q08345 913 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 GRAPQ13588 217 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 GRAPLQ8TC17 118 aaPredicted RBP11.74□□□□□ -0.53
RFC4-210ENST00000449502 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
RFC4-210ENST00000449502 HAUS7Q99871 368 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
RFC4-210ENST00000449502 SCN7AQ01118 1682 aa11.74□□□□□ -0.53
RFC4-210ENST00000449502 TAF5LO75529 589 aa11.73□□□□□ -0.53
RFC4-210ENST00000449502 ADORA1P30542 326 aa11.73□□□□□ -0.53
RFC4-210ENST00000449502 PDE6BP35913 854 aa11.73□□□□□ -0.53
RFC4-210ENST00000449502 FKBP4Q02790 459 aaKnown RBP eCLIP11.73□□□□□ -0.53
RFC4-210ENST00000449502 VPS37DQ86XT2 251 aa11.73□□□□□ -0.53
RFC4-210ENST00000449502 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
RFC4-210ENST00000449502 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
RFC4-210ENST00000449502 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
RFC4-210ENST00000449502 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
RFC4-210ENST00000449502 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
RFC4-210ENST00000449502 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 GOLIM4O00461 696 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 CAVIN4Q5BKX8 364 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 CWC27Q6UX04 472 aaKnown RBP11.72□□□□□ -0.53
RFC4-210ENST00000449502 VGLL2Q8N8G2 317 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 TBC1D32Q96NH3 1257 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 ANO2Q9NQ90 1003 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
RFC4-210ENST00000449502 BBOX1O75936 387 aa11.71□□□□□ -0.53
RFC4-210ENST00000449502 UBE4AQ14139 1066 aa11.71□□□□□ -0.53
RFC4-210ENST00000449502 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
RFC4-210ENST00000449502 ANKIB1Q9P2G1 1089 aa11.71□□□□□ -0.53
RFC4-210ENST00000449502 NUP98P52948 1817 aa11.71□□□□□ -0.54
RFC4-210ENST00000449502 FGFR2P21802 821 aa11.7□□□□□ -0.54
RFC4-210ENST00000449502 BECN1Q14457 450 aa11.7□□□□□ -0.54
RFC4-210ENST00000449502 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
RFC4-210ENST00000449502 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
RFC4-210ENST00000449502 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
RFC4-210ENST00000449502 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
RFC4-210ENST00000449502 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
RFC4-210ENST00000449502 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.547e-9■■□□□ 11.5
RFC4-210ENST00000449502 RAD50Q92878 1312 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 FRAT2O75474 233 aaPredicted RBP11.69□□□□□ -0.54
RFC4-210ENST00000449502 NPR1P16066 1061 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 ALDH1B1P30837 517 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 CRY2Q49AN0 593 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 ZSCAN25Q6NSZ9 544 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
RFC4-210ENST00000449502 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
RFC4-210ENST00000449502 RFX7Q2KHR2 1363 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 H0YIN7 160 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 SGSM2O43147 1006 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 EPB41L2O43491 1005 aaKnown RBP11.68□□□□□ -0.54
RFC4-210ENST00000449502 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
RFC4-210ENST00000449502 PHKA1P46020 1223 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
RFC4-210ENST00000449502 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.544e-10■□□□□ 8.7
RFC4-210ENST00000449502 EDC3Q96F86 508 aaKnown RBP11.68□□□□□ -0.54
RFC4-210ENST00000449502 MASTLQ96GX5 879 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 USP26Q9BXU7 913 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
RFC4-210ENST00000449502 ZNF804BA4D1E1 1349 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 XDHP47989 1333 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 KLRG2A4D1S0 409 aaPredicted RBP11.67□□□□□ -0.54
RFC4-210ENST00000449502 PPEF1O14829 653 aaPredicted RBP11.67□□□□□ -0.54
RFC4-210ENST00000449502 ZFYP08048 801 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms