RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 DOK7Q18PE1 504 aa21.4■■□□□ 1.02
PTMA-208ENST00000448874 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
PTMA-208ENST00000448874 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
PTMA-208ENST00000448874 ZC3H15Q8WU90 426 aaKnown RBP21.4■■□□□ 1.02
PTMA-208ENST00000448874 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
PTMA-208ENST00000448874 TLL2Q9Y6L7 1015 aa21.4■■□□□ 1.02
PTMA-208ENST00000448874 SCN9AQ15858 1988 aa21.39■■□□□ 1.02
PTMA-208ENST00000448874 RTL9Q8NET4 1388 aa21.39■■□□□ 1.02
PTMA-208ENST00000448874 UFL1O94874 794 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 CELF2O95319 508 aaKnown RBP21.39■■□□□ 1.01
PTMA-208ENST00000448874 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 GRM1Q13255 1194 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 CYP4F22Q6NT55 531 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 CAPNS2Q96L46 248 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 ANKIB1Q9P2G1 1089 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 MYH3P11055 1940 aa21.39■■□□□ 1.01
PTMA-208ENST00000448874 ECE1P42892 770 aa21.38■■□□□ 1.01
PTMA-208ENST00000448874 DPF2Q92785 391 aa21.38■■□□□ 1.01
PTMA-208ENST00000448874 ZC3H12CQ9C0D7 883 aaKnown RBP21.38■■□□□ 1.01
PTMA-208ENST00000448874 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
PTMA-208ENST00000448874 PRDM10Q9NQV6 1147 aa21.38■■□□□ 1.01
PTMA-208ENST00000448874 KCNQ5Q9NR82 932 aa21.38■■□□□ 1.01
PTMA-208ENST00000448874 GGA1Q9UJY5 639 aa21.38■■□□□ 1.01
PTMA-208ENST00000448874 IL16Q14005 1332 aa21.37■■□□□ 1.01
PTMA-208ENST00000448874 MAP2K1Q02750 393 aaPredicted RBP21.37■■□□□ 1.01
PTMA-208ENST00000448874 G2E3Q7L622 706 aa21.37■■□□□ 1.01
PTMA-208ENST00000448874 SAMD7Q7Z3H4 446 aa21.37■■□□□ 1.01
PTMA-208ENST00000448874 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
PTMA-208ENST00000448874 ZNF408Q9H9D4 720 aa21.37■■□□□ 1.01
PTMA-208ENST00000448874 SPEF2Q9C093 1822 aa21.36■■□□□ 1.01
PTMA-208ENST00000448874 RPS12P25398 132 aaKnown RBP21.36■■□□□ 1.01
PTMA-208ENST00000448874 CTSWP56202 376 aa21.36■■□□□ 1.01
PTMA-208ENST00000448874 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
PTMA-208ENST00000448874 TBC1D10BQ4KMP7 808 aaPredicted RBP21.36■■□□□ 1.01
PTMA-208ENST00000448874 CDC37L1Q7L3B6 337 aa21.36■■□□□ 1.01
PTMA-208ENST00000448874 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
PTMA-208ENST00000448874 LBX1P52954 281 aa21.35■■□□□ 1.01
PTMA-208ENST00000448874 CWF19L2Q2TBE0 894 aaKnown RBP21.35■■□□□ 1.01
PTMA-208ENST00000448874 SAPCD2Q86UD0 394 aa21.35■■□□□ 1.01
PTMA-208ENST00000448874 XDHP47989 1333 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 NEURL1BA8MQ27 555 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 G3V3G9 751 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 ANP32CO43423 234 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 EGFRP00533 1210 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 SLC4A2P04920 1241 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 HSPA8P11142 646 aaKnown RBP21.34■■□□□ 1.01
PTMA-208ENST00000448874 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
PTMA-208ENST00000448874 DCAF8Q5TAQ9 597 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 PSME4Q14997 1843 aa21.34■■□□□ 1.01
PTMA-208ENST00000448874 USP48Q86UV5 1035 aa21.33■■□□□ 1.01
PTMA-208ENST00000448874 TTLL11Q8NHH1 800 aa21.33■■□□□ 1.01
PTMA-208ENST00000448874 CDC5LQ99459 802 aaKnown RBP21.33■■□□□ 1.01
PTMA-208ENST00000448874 VIL1P09327 827 aaKnown RBP21.32■■□□□ 1
PTMA-208ENST00000448874 RBM26Q5T8P6 1007 aaKnown RBP21.32■■□□□ 1
PTMA-208ENST00000448874 GREM2Q9H772 168 aa21.32■■□□□ 1
PTMA-208ENST00000448874 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
PTMA-208ENST00000448874 CACNA1FO60840 1977 aa21.31■■□□□ 1
PTMA-208ENST00000448874 ATP2B4P23634 1241 aa21.31■■□□□ 1
PTMA-208ENST00000448874 FLIIQ13045 1269 aa21.31■■□□□ 1
PTMA-208ENST00000448874 UBE3BQ7Z3V4 1068 aa21.31■■□□□ 1
PTMA-208ENST00000448874 HHIPL1Q96JK4 782 aa21.31■■□□□ 1
PTMA-208ENST00000448874 SALL2Q9Y467 1007 aaPredicted RBP21.31■■□□□ 1
PTMA-208ENST00000448874 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
PTMA-208ENST00000448874 AOC2O75106 756 aa21.3■■□□□ 1
PTMA-208ENST00000448874 KIF4BQ2VIQ3 1234 aa21.3■■□□□ 1
PTMA-208ENST00000448874 DLK2Q6UY11 383 aa21.3■■□□□ 1
PTMA-208ENST00000448874 KRT26Q7Z3Y9 468 aa21.3■■□□□ 1
PTMA-208ENST00000448874 BEGAINQ9BUH8 593 aa21.3■■□□□ 1
PTMA-208ENST00000448874 ZNF609O15014 1411 aa21.29■■□□□ 1
PTMA-208ENST00000448874 H7C1W4 665 aa21.29■■□□□ 1
PTMA-208ENST00000448874 MAP2K2P36507 400 aa21.29■■□□□ 1
PTMA-208ENST00000448874 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
PTMA-208ENST00000448874 BSDC1Q9NW68 430 aaPredicted RBP21.29■■□□□ 1
PTMA-208ENST00000448874 ADM5C9JUS6 153 aa21.28■■□□□ 1
PTMA-208ENST00000448874 RSBN1LQ6PCB5 846 aaPredicted RBP21.28■■□□□ 1
PTMA-208ENST00000448874 WDR63Q8IWG1 891 aa21.28■■□□□ 1
PTMA-208ENST00000448874 DNAAF4Q8WXU2 420 aa21.28■■□□□ 1
PTMA-208ENST00000448874 DCPSQ96C86 337 aaKnown RBP21.28■■□□□ 1
PTMA-208ENST00000448874 MINPP1Q9UNW1 487 aa21.28■■□□□ 1
PTMA-208ENST00000448874 MED23Q9ULK4 1368 aa21.27■■□□□ 1
PTMA-208ENST00000448874 WTIPA6NIX2 430 aaPredicted RBP21.27■■□□□ 1
PTMA-208ENST00000448874 GCKRQ14397 625 aa21.27■■□□□ 1
PTMA-208ENST00000448874 AGBL3Q8NEM8 1001 aa21.27■■□□□ 1
PTMA-208ENST00000448874 GGA3Q9NZ52 723 aa21.27■■□□□ 1
PTMA-208ENST00000448874 VAMP4O75379 141 aa21.26■□□□□ 0.99
PTMA-208ENST00000448874 HUNKP57058 714 aa21.26■□□□□ 0.99
PTMA-208ENST00000448874 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
PTMA-208ENST00000448874 MYH16Q9H6N6 1097 aa21.26■□□□□ 0.99
PTMA-208ENST00000448874 ASTN2O75129 1339 aaPredicted RBP21.26■□□□□ 0.99
PTMA-208ENST00000448874 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
PTMA-208ENST00000448874 ZNF280AP59817 542 aaPredicted RBP21.25■□□□□ 0.99
PTMA-208ENST00000448874 EXOSC9Q06265 439 aaKnown RBP21.25■□□□□ 0.99
PTMA-208ENST00000448874 PODNQ7Z5L7 613 aa21.25■□□□□ 0.99
PTMA-208ENST00000448874 LINS1Q8NG48 757 aa21.25■□□□□ 0.99
PTMA-208ENST00000448874 USP17L3A6NCW0 530 aa21.24■□□□□ 0.99
PTMA-208ENST00000448874 USP17L4A6NCW7 530 aa21.24■□□□□ 0.99
PTMA-208ENST00000448874 ITGA6P23229 1130 aa21.24■□□□□ 0.99
PTMA-208ENST00000448874 CCT4P50991 539 aaKnown RBP21.24■□□□□ 0.99
PTMA-208ENST00000448874 CASP7P55210 303 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms