RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 UFL1O94874 794 aa25.11■■□□□ 1.61
VCP-203ENST00000448530 GCKRQ14397 625 aa25.11■■□□□ 1.61
VCP-203ENST00000448530 LINS1Q8NG48 757 aa25.11■■□□□ 1.61
VCP-203ENST00000448530 TTLL11Q8NHH1 800 aa25.11■■□□□ 1.61
VCP-203ENST00000448530 MKRN1Q9UHC7 482 aaKnown RBP25.11■■□□□ 1.61
VCP-203ENST00000448530 ECE2O60344 883 aa25.09■■□□□ 1.61
VCP-203ENST00000448530 DOK7Q18PE1 504 aa25.09■■□□□ 1.61
VCP-203ENST00000448530 GPR101Q96P66 508 aaPredicted RBP25.09■■□□□ 1.61
VCP-203ENST00000448530 XDHP47989 1333 aa25.09■■□□□ 1.61
VCP-203ENST00000448530 GREM2Q9H772 168 aa25.08■■□□□ 1.61
VCP-203ENST00000448530 RTL9Q8NET4 1388 aa25.07■■□□□ 1.6
VCP-203ENST00000448530 H7C1D1 291 aa25.07■■□□□ 1.6
VCP-203ENST00000448530 CNOT7Q9UIV1 285 aaKnown RBP25.07■■□□□ 1.6
VCP-203ENST00000448530 SPEF2Q9C093 1822 aa25.07■■□□□ 1.6
VCP-203ENST00000448530 PSMD14O00487 310 aa25.06■■□□□ 1.6
VCP-203ENST00000448530 ATP2B4P23634 1241 aa25.05■■□□□ 1.6
VCP-203ENST00000448530 IGHMBP2P38935 993 aaKnown RBP25.05■■□□□ 1.6
VCP-203ENST00000448530 DPF2Q92785 391 aa25.05■■□□□ 1.6
VCP-203ENST00000448530 PLA2G12BQ9BX93 195 aa25.05■■□□□ 1.6
VCP-203ENST00000448530 BSDC1Q9NW68 430 aaPredicted RBP25.05■■□□□ 1.6
VCP-203ENST00000448530 ZBTB12Q9Y330 459 aaPredicted RBP25.05■■□□□ 1.6
VCP-203ENST00000448530 CNTNAP1P78357 1384 aa25.05■■□□□ 1.6
VCP-203ENST00000448530 F6X3S4 739 aa25.04■■□□□ 1.6
VCP-203ENST00000448530 RPS12P25398 132 aaKnown RBP25.04■■□□□ 1.6
VCP-203ENST00000448530 MICALL2Q8IY33 904 aa25.04■■□□□ 1.6
VCP-203ENST00000448530 ZNF521Q96K83 1311 aa25.04■■□□□ 1.6
VCP-203ENST00000448530 ABT1Q9ULW3 272 aaKnown RBP25.03■■□□□ 1.6
VCP-203ENST00000448530 ZC3H15Q8WU90 426 aaKnown RBP25.02■■□□□ 1.6
VCP-203ENST00000448530 MINPP1Q9UNW1 487 aa25.02■■□□□ 1.6
VCP-203ENST00000448530 TRPM7Q96QT4 1865 aa25.02■■□□□ 1.6
VCP-203ENST00000448530 ITGA6P23229 1130 aa25.01■■□□□ 1.59
VCP-203ENST00000448530 CASP7P55210 303 aa25.01■■□□□ 1.59
VCP-203ENST00000448530 BEND3Q5T5X7 828 aa25.01■■□□□ 1.59
VCP-203ENST00000448530 MPHOSPH8Q99549 860 aa25.01■■□□□ 1.59
VCP-203ENST00000448530 KCNQ5Q9NR82 932 aa25.01■■□□□ 1.59
VCP-203ENST00000448530 E9PSI1 815 aa25■■□□□ 1.59
VCP-203ENST00000448530 HSPA1AP0DMV8 641 aaKnown RBP25■■□□□ 1.59
VCP-203ENST00000448530 HSPA1BP0DMV9 641 aaKnown RBP25■■□□□ 1.59
VCP-203ENST00000448530 FAM161AQ3B820 660 aa25■■□□□ 1.59
VCP-203ENST00000448530 TRPM4Q8TD43 1214 aa25■■□□□ 1.59
VCP-203ENST00000448530 TRAF5O00463 557 aa24.99■■□□□ 1.59
VCP-203ENST00000448530 CSF1RP07333 972 aa24.99■■□□□ 1.59
VCP-203ENST00000448530 DEFB115Q30KQ5 88 aa24.99■■□□□ 1.59
VCP-203ENST00000448530 SLC4A10Q6U841 1118 aa24.99■■□□□ 1.59
VCP-203ENST00000448530 SCN9AQ15858 1988 aa24.98■■□□□ 1.59
VCP-203ENST00000448530 SHTN1A0MZ66 631 aa24.98■■□□□ 1.59
VCP-203ENST00000448530 ANKRD18BA2A2Z9 1011 aa24.98■■□□□ 1.59
VCP-203ENST00000448530 VIL1P09327 827 aaKnown RBP24.98■■□□□ 1.59
VCP-203ENST00000448530 CCT4P50991 539 aaKnown RBP24.98■■□□□ 1.59
VCP-203ENST00000448530 HIRAP54198 1017 aaPredicted RBP24.98■■□□□ 1.59
VCP-203ENST00000448530 ANKRD2Q9GZV1 360 aa24.98■■□□□ 1.59
VCP-203ENST00000448530 PGAP2Q9UHJ9 254 aa24.98■■□□□ 1.59
VCP-203ENST00000448530 CHMP3Q9Y3E7 222 aa24.98■■□□□ 1.59
VCP-203ENST00000448530 PCNTO95613 3336 aa24.97■■□□□ 1.59
VCP-203ENST00000448530 RASSF10A6NK89 507 aa24.97■■□□□ 1.59
VCP-203ENST00000448530 VEGFBP49765 207 aa24.97■■□□□ 1.59
VCP-203ENST00000448530 FMR1Q06787 632 aaKnown RBP eCLIP24.97■■□□□ 1.596e-10■■■□□ 19.1
VCP-203ENST00000448530 TBC1D10BQ4KMP7 808 aaPredicted RBP24.97■■□□□ 1.59
VCP-203ENST00000448530 SAMD7Q7Z3H4 446 aa24.97■■□□□ 1.59
VCP-203ENST00000448530 C9orf78Q9NZ63 289 aaPredicted RBP24.97■■□□□ 1.59
VCP-203ENST00000448530 MED23Q9ULK4 1368 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 GRM8O00222 908 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 ALDH1L1O75891 902 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 IFIT5Q13325 482 aaKnown RBP24.96■■□□□ 1.59
VCP-203ENST00000448530 RBM26Q5T8P6 1007 aaKnown RBP24.96■■□□□ 1.59
VCP-203ENST00000448530 IFFO2Q5TF58 517 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 CDC37L1Q7L3B6 337 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 PODNQ7Z5L7 613 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 GLIS2Q9BZE0 524 aaPredicted RBP24.96■■□□□ 1.59
VCP-203ENST00000448530 SRCIN1Q9C0H9 1055 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 LEMD3Q9Y2U8 911 aa24.96■■□□□ 1.59
VCP-203ENST00000448530 PSME4Q14997 1843 aa24.95■■□□□ 1.58
VCP-203ENST00000448530 KCNJ4P48050 445 aa24.94■■□□□ 1.58
VCP-203ENST00000448530 RSBN1LQ6PCB5 846 aaPredicted RBP24.94■■□□□ 1.58
VCP-203ENST00000448530 PAXIP1Q6ZW49 1069 aaPredicted RBP24.94■■□□□ 1.58
VCP-203ENST00000448530 USP17L3A6NCW0 530 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 USP17L4A6NCW7 530 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 CCER2I3L3R5 266 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 CELF2O95319 508 aaKnown RBP24.93■■□□□ 1.58
VCP-203ENST00000448530 FOXO4P98177 505 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 CST9Q5W186 159 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 USP17L1Q7RTZ2 530 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 AGBL3Q8NEM8 1001 aa24.93■■□□□ 1.58
VCP-203ENST00000448530 ZNF804BA4D1E1 1349 aa24.92■■□□□ 1.58
VCP-203ENST00000448530 WTIPA6NIX2 430 aaPredicted RBP24.92■■□□□ 1.58
VCP-203ENST00000448530 SLFN5Q08AF3 891 aa24.92■■□□□ 1.58
VCP-203ENST00000448530 KIF4BQ2VIQ3 1234 aa24.92■■□□□ 1.58
VCP-203ENST00000448530 TAF7LQ5H9L4 462 aa24.92■■□□□ 1.58
VCP-203ENST00000448530 LMBR1LQ6UX01 489 aa24.92■■□□□ 1.58
VCP-203ENST00000448530 ZNF408Q9H9D4 720 aa24.92■■□□□ 1.58
VCP-203ENST00000448530 ECE1P42892 770 aa24.91■■□□□ 1.58
VCP-203ENST00000448530 CCDC57Q2TAC2 916 aa24.91■■□□□ 1.58
VCP-203ENST00000448530 USP48Q86UV5 1035 aa24.91■■□□□ 1.58
VCP-203ENST00000448530 AIDAQ96BJ3 306 aa24.91■■□□□ 1.58
VCP-203ENST00000448530 DCPSQ96C86 337 aaKnown RBP24.91■■□□□ 1.58
VCP-203ENST00000448530 COA1Q9GZY4 146 aa24.91■■□□□ 1.58
VCP-203ENST00000448530 WDR33Q9C0J8 1336 aaKnown RBP24.9■■□□□ 1.58
VCP-203ENST00000448530 ZNF609O15014 1411 aa24.9■■□□□ 1.58
VCP-203ENST00000448530 CHRNDQ07001 517 aa24.9■■□□□ 1.58
VCP-203ENST00000448530 MRPL50Q8N5N7 158 aaKnown RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms