RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 ARHGEF12Q9NZN5 1544 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
FN1-212ENST00000446046 CASQ1P31415 396 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 GSDMDP57764 484 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 RTN1Q16799 776 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 ZBTB43O43298 467 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 TCERG1LQ5VWI1 586 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 FAM177A1Q8N128 213 aaPredicted RBP13.4□□□□□ -0.26
FN1-212ENST00000446046 ARHGEF10LQ9HCE6 1279 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 PHACTR2O75167 634 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
FN1-212ENST00000446046 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
FN1-212ENST00000446046 VEZTQ9HBM0 779 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 HAUS2Q9NVX0 235 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 NEMFO60524 1076 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
FN1-212ENST00000446046 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
FN1-212ENST00000446046 FLAD1Q8NFF5 587 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 CTAGE1Q96RT6 745 aa13.4□□□□□ -0.26
FN1-212ENST00000446046 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 LMAN1P49257 510 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 TDRD12Q587J7 1177 aaKnown RBP13.39□□□□□ -0.27
FN1-212ENST00000446046 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
FN1-212ENST00000446046 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
FN1-212ENST00000446046 FERP16591 822 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 MAP2K1Q02750 393 aaPredicted RBP13.39□□□□□ -0.27
FN1-212ENST00000446046 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 SMARCC2Q8TAQ2 1214 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 USP16Q9Y5T5 823 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 STAT6P42226 847 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 TAF12Q16514 161 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 H0YIN7 160 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 GRM1Q13255 1194 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 STX1AQ16623 288 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
FN1-212ENST00000446046 PRC1O43663 620 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 CNBD1Q8NA66 436 aa13.39□□□□□ -0.27
FN1-212ENST00000446046 USP8P40818 1118 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 MRPS9P82933 396 aaKnown RBP13.38□□□□□ -0.27
FN1-212ENST00000446046 MCMDC2Q4G0Z9 681 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 IKBKGQ9Y6K9 419 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 LIG1P18858 919 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 FSD2A1L4K1 749 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
FN1-212ENST00000446046 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.272e-32■□□□□ 9.9
FN1-212ENST00000446046 F6X3S4 739 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
FN1-212ENST00000446046 CDAN1Q8IWY9 1227 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 KIF18AQ8NI77 898 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
FN1-212ENST00000446046 XAGE3Q8WTP9 111 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 SLC5A4Q9NY91 659 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 CCDC102BQ68D86 513 aa13.37□□□□□ -0.27
FN1-212ENST00000446046 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
FN1-212ENST00000446046 GAS8O95995 478 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 DENND2AQ9ULE3 1009 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 TTC6Q86TZ1 520 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 ARHGEF6Q15052 776 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 KDM5CP41229 1560 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 IDEP14735 1019 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 NAPAP54920 295 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
FN1-212ENST00000446046 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
FN1-212ENST00000446046 UBXN4Q92575 508 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 ORC3Q9UBD5 711 aaPredicted RBP13.35□□□□□ -0.27
FN1-212ENST00000446046 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
FN1-212ENST00000446046 GNPATO15228 680 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 SLC8A3P57103 927 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 IVNS1ABPQ9Y6Y0 642 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 SNX16P57768 344 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 SELENOOQ9BVL4 669 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 TRIM27P14373 513 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
FN1-212ENST00000446046 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 NOP2P46087 812 aaKnown RBP13.34□□□□□ -0.27
FN1-212ENST00000446046 PICALMQ13492 652 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 BTG4Q9NY30 223 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 PIK3C2GO75747 1445 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms