RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
UBR3-206ENST00000444475 STAT3P40763 770 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 BCAMP50895 628 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 MAP3K9P80192 1104 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 RASSF3Q86WH2 238 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 MIGA1Q8NAN2 632 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 JARID2Q92833 1246 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 CCDC47Q96A33 483 aaKnown RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 SEC16BQ96JE7 1060 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 CITED4Q96RK1 184 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 CAMKK2Q96RR4 588 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 FAM167BQ9BTA0 163 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 TSPYL2Q9H2G4 693 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 ZBTB3Q9H5J0 574 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 GTF2IRD1Q9UHL9 959 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 EVLQ9UI08 416 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 SMC3Q9UQE7 1217 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 TRIM64CA6NLI5 447 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 MZF1P28698 734 aaPredicted RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 SMAP1Q8IYB5 467 aaPredicted RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 STRBPQ96SI9 672 aaKnown RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 SELENOOQ9BVL4 669 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 CCDC113Q9H0I3 377 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 NOD1Q9Y239 953 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 PABPN1LA6NDY0 278 aaKnown RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 C9IYK1 514 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 GLULP15104 373 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 ZNF132P52740 706 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 TM4SF20Q53R12 229 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 ANKS3Q6ZW76 656 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 CPXCR1Q8N123 301 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 OSBPL5Q9H0X9 879 aaPredicted RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 ZIM2Q9NZV7 527 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 LEMD3Q9Y2U8 911 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 A6NCN8 305 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 ZBTB7BO15156 539 aaPredicted RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 HMMRO75330 724 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 NAT2P11245 290 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 PIK3CAP42336 1068 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 DCTN1Q14203 1278 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 SEPT2Q15019 361 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 FAM102BQ5T8I3 360 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 MZT2AQ6P582 158 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 C1orf122Q6ZSJ8 110 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 ERMP1Q7Z2K6 904 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 COL26A1Q96A83 441 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 PRIMPOLQ96LW4 560 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 TMCC3Q9ULS5 477 aa4.81□□□□□ -1.64
UBR3-206ENST00000444475 THOC2Q8NI27 1593 aaKnown RBP4.81□□□□□ -1.64
UBR3-206ENST00000444475 CAPN15O75808 1086 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 HSP90AB1P08238 724 aaKnown RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 GNA15P30679 374 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 CHMP4BP1P59074 171 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 IGF2-ASQ6U949 168 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 PNMA8AQ86V59 439 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 NUDT12Q9BQG2 462 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 KIAA1024Q9UPX6 916 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 DAAM1Q9Y4D1 1078 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 HALP42357 657 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 DGKGP49619 791 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 NR1H3Q13133 447 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 KSR2Q6VAB6 950 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 STK11IPQ8N1F8 1099 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 SRRTQ9BXP5 876 aaKnown RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 IP6K2Q9UHH9 426 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 PCDHGC3Q9UN70 934 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 AK5Q9Y6K8 562 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 A0A087X0B3 334 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 NUTM2BA6NNL0 878 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 NUTM2EB1AL46 878 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 KCNA2P16389 499 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 IRX3P78415 501 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 NUTM2DQ5VT03 806 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 CYB5RLQ6IPT4 315 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 TRAF7Q6Q0C0 670 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 POTEEQ6S8J3 1075 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 RNF180Q86T96 592 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 NUTM2AQ8IVF1 878 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 GPR101Q96P66 508 aaPredicted RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 PURBQ96QR8 312 aaKnown RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 CSRNP2Q9H175 543 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 RANBP17Q9H2T7 1088 aaKnown RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 CCDC87Q9NVE4 849 aa4.8□□□□□ -1.64
UBR3-206ENST00000444475 ISY1Q9ULR0 285 aaKnown RBP4.8□□□□□ -1.64
UBR3-206ENST00000444475 ZBTB24O43167 697 aaPredicted RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 FIBPO43427 364 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 FBXO45P0C2W1 286 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 WEE1P30291 646 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 NBPF8Q3BBV2 869 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 ALKBH2Q6NS38 261 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 MORC1Q86VD1 984 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 HSCBQ8IWL3 235 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 CLASRPQ8N2M8 674 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms