RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CCDC9Q9Y3X0 531 aaKnown RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ZNF609O15014 1411 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 KIAA1551Q9HCM1 1747 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 UBR3Q6ZT12 1888 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 WDR19Q8NEZ3 1342 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 MYH7P12883 1935 aa3.4□□□□□ -1.86
LINC00393-201ENST00000443621 MED23Q9ULK4 1368 aa3.4□□□□□ -1.86
LINC00393-201ENST00000443621 DOCK2Q92608 1830 aa3.4□□□□□ -1.86
LINC00393-201ENST00000443621 A0A1B0GUL7 405 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 NUTM2BA6NNL0 878 aaPredicted RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 NUTM2EB1AL46 878 aaPredicted RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ATP5J2-PTCD1G3V325 749 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ZPR1O75312 459 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 MAP4K4O95819 1239 aaPredicted RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 C4AP0C0L4 1744 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 GNAT2P19087 354 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 FGFR2P21802 821 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ITGA6P23229 1130 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 IGHMBP2P38935 993 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 PUM3Q15397 648 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ALX1Q15699 326 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 HLFQ16534 295 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 MCMDC2Q4G0Z9 681 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 TAF7LQ5H9L4 462 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 TRAPPC3LQ5T215 181 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 VPS53Q5VIR6 699 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 KRT27Q7Z3Y8 459 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 NUTM2AQ8IVF1 878 aaPredicted RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 SEPT12Q8IYM1 358 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 NLGN1Q8N2Q7 840 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ZGPATQ8N5A5 531 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 NLRP3Q96P20 1036 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 SETDB2Q96T68 719 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 TBC1D2Q9BYX2 928 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 LSG1Q9H089 658 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ZBTB3Q9H5J0 574 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ZSWIM6Q9HCJ5 1215 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 SH2B1Q9NRF2 756 aaPredicted RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 DIAPH3Q9NSV4 1193 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 GNL3LQ9NVN8 582 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 NRXN2Q9P2S2 1712 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 CTNNA3Q9UI47 895 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 DBNLQ9UJU6 430 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ISY1Q9ULR0 285 aaKnown RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 U3KPZ7 1027 aaPredicted RBP3.4□□□□□ -1.87
LINC00393-201ENST00000443621 AKAP11Q9UKA4 1901 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF804BA4D1E1 1349 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC171Q6TFL3 1326 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 UBN2Q6ZU65 1347 aa3.4□□□□□ -1.87
LINC00393-201ENST00000443621 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 MSH5O43196 834 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 SMARCA5O60264 1052 aaPredicted RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 BBOX1O75936 387 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 IFIT1P09914 478 aaKnown RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 SLC5A1P13866 664 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 PDCP20941 246 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 TM4SF1P30408 202 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 HOXA10P31260 410 aaPredicted RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 RFC4P35249 363 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 MMP14P50281 582 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 RCAN1P53805 252 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 EVCP57679 992 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 TFCP2Q12800 502 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 ATP2B3Q16720 1220 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 SKOR2Q2VWA4 1001 aaPredicted RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 CRY2Q49AN0 593 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 ZMYM1Q5SVZ6 1142 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 SUSD4Q5VX71 490 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 GIMAP6Q6P9H5 292 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 CCDC125Q86Z20 511 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 LINC00116Q8NCU8 138 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 OTUD7AQ8TE49 926 aaPredicted RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 RILPL2Q969X0 211 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 FAM89AQ96GI7 184 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 XAGE2Q96GT9 111 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 MPHOSPH8Q99549 860 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 AGXT2Q9BYV1 514 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 IL1RAPL2Q9NP60 686 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 PAG1Q9NWQ8 432 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 CCNL1Q9UK58 526 aaPredicted RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 TBC1D2BQ9UPU7 963 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 PA2G4Q9UQ80 394 aaKnown RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 NIP7Q9Y221 180 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 LEMD3Q9Y2U8 911 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 SUGT1Q9Y2Z0 365 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.39□□□□□ -1.87
LINC00393-201ENST00000443621 ATP6V1DQ9Y5K8 247 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 BRWD3Q6RI45 1802 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 PNPLA7Q6ZV29 1317 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 SALL1Q9NSC2 1324 aa3.39□□□□□ -1.87
LINC00393-201ENST00000443621 A0A1B0GUL6 1792 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 CASZ1Q86V15 1759 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 DDX11L8A8MPP1 907 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 KCNQ2O43526 872 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 TAF5LO75529 589 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 ALDH1B1P30837 517 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 RPS8P62241 208 aaKnown RBP3.38□□□□□ -1.87
LINC00393-201ENST00000443621 MAP3K12Q12852 859 aa3.38□□□□□ -1.87
LINC00393-201ENST00000443621 RAB3GAP1Q15042 981 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms