RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ESR2Q92731 530 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 NLRP3Q96P20 1036 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 KAT14Q9H8E8 782 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 PCDH11XQ9BZA7 1347 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 PCDH11YQ9BZA8 1340 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 URI1O94763 535 aaPredicted RBP25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 TMEM132AQ24JP5 1023 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 CRNKL1Q9BZJ0 848 aaKnown RBP25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 SUCLG2Q96I99 432 aa25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 SKIDA1Q1XH10 827 aa25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 PRM3Q9NNZ6 103 aa25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 MARCKSP29966 332 aaPredicted RBP25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 SLF2Q8IX21 1173 aa25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 PLBD2Q8NHP8 589 aa25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 KCNG4Q8TDN1 519 aa25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 MRPS27Q92552 414 aaKnown RBP25.88■■□□□ 1.73
CTDSPL-206ENST00000443503 A1BGP04217 495 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 UTP14AQ9BVJ6 771 aaKnown RBP25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 PDCL3Q9H2J4 239 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 RTN1Q16799 776 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 METP08581 1390 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 CCDC129Q6ZRS4 1044 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 FAM227BQ96M60 508 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 EYA2O00167 538 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 DDX17Q92841 729 aaKnown RBP25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 SETDB2Q96T68 719 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 USP44Q9H0E7 712 aa25.87■■□□□ 1.73
CTDSPL-206ENST00000443503 UBA7P41226 1012 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 SPTY2D1Q68D10 685 aaPredicted RBP25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 CNNM2Q9H8M5 875 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 A0A1B0GUL7 405 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 KCNQ3O43525 872 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 TNNI3KQ59H18 835 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 NAA16Q6N069 864 aaPredicted RBP25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 SLC52A2Q9HAB3 445 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 FPGT-TNNI3KV9GXZ4 949 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 NEMFO60524 1076 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 ERLIN1O75477 346 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 ARHGEF10O15013 1369 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 PTPDC1A2A3K4 754 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 RRP9O43818 475 aaKnown RBP25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 GSDMDP57764 484 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 RAB34Q9BZG1 259 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 DNAJC25Q9H1X3 360 aa25.86■■□□□ 1.73
CTDSPL-206ENST00000443503 TMTC2Q8N394 836 aa25.85■■□□□ 1.73
CTDSPL-206ENST00000443503 SETQ01105 290 aaPredicted RBP25.85■■□□□ 1.73
CTDSPL-206ENST00000443503 DTNBO60941 627 aa25.85■■□□□ 1.73
CTDSPL-206ENST00000443503 BTG4Q9NY30 223 aa25.84■■□□□ 1.73
CTDSPL-206ENST00000443503 HMGB2P26583 209 aaKnown RBP25.84■■□□□ 1.73
CTDSPL-206ENST00000443503 SNX14Q9Y5W7 946 aa25.84■■□□□ 1.73
CTDSPL-206ENST00000443503 TXLNBQ8N3L3 684 aa25.84■■□□□ 1.73
CTDSPL-206ENST00000443503 MIGA1Q8NAN2 632 aa25.84■■□□□ 1.73
CTDSPL-206ENST00000443503 SMARCC1Q92922 1105 aaPredicted RBP25.84■■□□□ 1.73
CTDSPL-206ENST00000443503 RTL1A6NKG5 1358 aa25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 GSPT1P15170 499 aaKnown RBP25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 GCKRQ14397 625 aa25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 IDEP14735 1019 aa25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 IFIT1BQ5T764 474 aaKnown RBP25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 TCP11L1Q9NUJ3 509 aa25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 ZNF594Q96JF6 807 aaPredicted RBP25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 NDUFB9Q9Y6M9 179 aa25.83■■□□□ 1.73
CTDSPL-206ENST00000443503 TMEM266Q2M3C6 531 aa25.83■■□□□ 1.72
CTDSPL-206ENST00000443503 CCDC186Q7Z3E2 898 aa25.82■■□□□ 1.72
CTDSPL-206ENST00000443503 ZNF397Q8NF99 534 aaPredicted RBP25.82■■□□□ 1.72
CTDSPL-206ENST00000443503 KIF4BQ2VIQ3 1234 aa25.82■■□□□ 1.72
CTDSPL-206ENST00000443503 TTC12Q9H892 705 aaPredicted RBP25.82■■□□□ 1.72
CTDSPL-206ENST00000443503 SEPT11Q9NVA2 429 aaKnown RBP25.82■■□□□ 1.72
CTDSPL-206ENST00000443503 RXRAP19793 462 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 HSP90AA4PQ58FG1 418 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 AOX1Q06278 1338 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 CLCN1P35523 988 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 FKBP15Q5T1M5 1219 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 KDM5DQ9BY66 1539 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 SPTLC2O15270 562 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 MAGEB6Q8N7X4 407 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 TYRO3Q06418 890 aa25.81■■□□□ 1.72
CTDSPL-206ENST00000443503 PATL2C9JE40 543 aaKnown RBP25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 SLC27A2O14975 620 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 MYOM2P54296 1465 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 FAM173BQ6P4H8 233 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 NUP88Q99567 741 aaPredicted RBP25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 MYO6Q9UM54 1294 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 KIF5CO60282 957 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 CCDC191Q8NCU4 936 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 CCDC12Q8WUD4 166 aaPredicted RBP25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 KANK3Q6NY19 840 aa25.8■■□□□ 1.72
CTDSPL-206ENST00000443503 UBA5Q9GZZ9 404 aa25.79■■□□□ 1.72
CTDSPL-206ENST00000443503 GIGYF1O75420 1035 aaPredicted RBP25.79■■□□□ 1.72
CTDSPL-206ENST00000443503 C8orf37Q96NL8 207 aa25.78■■□□□ 1.72
CTDSPL-206ENST00000443503 AFMP43652 599 aa25.78■■□□□ 1.72
CTDSPL-206ENST00000443503 CACNA2D4Q7Z3S7 1137 aa25.78■■□□□ 1.72
CTDSPL-206ENST00000443503 RPS6KB1P23443 525 aa25.78■■□□□ 1.72
CTDSPL-206ENST00000443503 SSH3Q8TE77 659 aa25.78■■□□□ 1.72
CTDSPL-206ENST00000443503 SPA17Q15506 151 aa25.78■■□□□ 1.72
CTDSPL-206ENST00000443503 AOPEPQ8N6M6 819 aa25.77■■□□□ 1.72
CTDSPL-206ENST00000443503 ZKSCAN5Q9Y2L8 839 aa25.77■■□□□ 1.72
CTDSPL-206ENST00000443503 TMX1Q9H3N1 280 aa25.77■■□□□ 1.72
CTDSPL-206ENST00000443503 PRKCSHP14314 528 aaPredicted RBP25.76■■□□□ 1.72
CTDSPL-206ENST00000443503 TMCO3Q6UWJ1 677 aa25.76■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms