RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 FZD9O00144 591 aa18.87■□□□□ 0.61
CSNK1E-210ENST00000442216 MS4A1P11836 297 aa18.87■□□□□ 0.61
CSNK1E-210ENST00000442216 DZIP1LQ8IYY4 767 aaKnown RBP18.87■□□□□ 0.61
CSNK1E-210ENST00000442216 ANKRD44Q8N8A2 993 aa18.87■□□□□ 0.61
CSNK1E-210ENST00000442216 CLUAP1Q96AJ1 413 aa18.87■□□□□ 0.61
CSNK1E-210ENST00000442216 ANKIB1Q9P2G1 1089 aa18.87■□□□□ 0.61
CSNK1E-210ENST00000442216 COL4A5P29400 1685 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 ATP2B4P23634 1241 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 FTSJ3Q8IY81 847 aaKnown RBP18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 TBC1D16Q8TBP0 767 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 ANKRD2Q9GZV1 360 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 POLLQ9UGP5 575 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 GGA1Q9UJY5 639 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 TNNQ9UQP3 1299 aa18.86■□□□□ 0.61
CSNK1E-210ENST00000442216 C6orf229H3BNL8 230 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 AOC3Q16853 763 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 TAF7LQ5H9L4 462 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 TMEM57Q8N5G2 664 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 MEIS3Q99687 375 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 SCN4AP35499 1836 aa18.85■□□□□ 0.61
CSNK1E-210ENST00000442216 LEMD3Q9Y2U8 911 aa18.84■□□□□ 0.61
CSNK1E-210ENST00000442216 UFL1O94874 794 aa18.83■□□□□ 0.6
CSNK1E-210ENST00000442216 EIF6P56537 245 aaKnown RBP18.83■□□□□ 0.6
CSNK1E-210ENST00000442216 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.6
CSNK1E-210ENST00000442216 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.6
CSNK1E-210ENST00000442216 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.6
CSNK1E-210ENST00000442216 PSME4Q14997 1843 aa18.82■□□□□ 0.6
CSNK1E-210ENST00000442216 CHRNDQ07001 517 aa18.82■□□□□ 0.6
CSNK1E-210ENST00000442216 ZC3H12CQ9C0D7 883 aaKnown RBP18.82■□□□□ 0.6
CSNK1E-210ENST00000442216 LRRFIP2Q9Y608 721 aaKnown RBP18.82■□□□□ 0.6
CSNK1E-210ENST00000442216 RLBP1P12271 317 aa18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 GPC2Q8N158 579 aa18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 ZNF594Q96JF6 807 aaPredicted RBP18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 CNNM1Q9NRU3 951 aa18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
CSNK1E-210ENST00000442216 ZNF541Q9H0D2 1346 aa18.8■□□□□ 0.6
CSNK1E-210ENST00000442216 GNAI2P04899 355 aa18.8■□□□□ 0.6
CSNK1E-210ENST00000442216 FBXO3Q9UK99 471 aa18.8■□□□□ 0.6
CSNK1E-210ENST00000442216 ZNF804BA4D1E1 1349 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 MROH5Q6ZUA9 1318 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 KIF3CO14782 793 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 DDNO94850 711 aaPredicted RBP18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 RFX5P48382 616 aaPredicted RBP18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 MTX1Q13505 466 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 RIPOR2Q9Y4F9 1068 aa18.79■□□□□ 0.6
CSNK1E-210ENST00000442216 RIMBP2O15034 1052 aa18.78■□□□□ 0.6
CSNK1E-210ENST00000442216 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-210ENST00000442216 VEGFAP15692 232 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-210ENST00000442216 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
CSNK1E-210ENST00000442216 SCN9AQ15858 1988 aa18.78■□□□□ 0.6
CSNK1E-210ENST00000442216 PTPN12Q05209 780 aaKnown RBP18.77■□□□□ 0.6
CSNK1E-210ENST00000442216 CXCL9Q07325 125 aa18.77■□□□□ 0.6
CSNK1E-210ENST00000442216 PDE3AQ14432 1141 aa18.77■□□□□ 0.6
CSNK1E-210ENST00000442216 TNIP1Q15025 636 aa18.77■□□□□ 0.6
CSNK1E-210ENST00000442216 C15orf52Q6ZUT6 534 aaKnown RBP18.77■□□□□ 0.6
CSNK1E-210ENST00000442216 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 YDJCA8MPS7 323 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 POTECB2RU33 542 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 G3V3G9 751 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 ECE2O60344 883 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 KCNJ4P48050 445 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 UBE4AQ14139 1066 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 DCAF8Q5TAQ9 597 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 CIAPIN1Q6FI81 312 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 PODNQ7Z5L7 613 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 PANK1Q8TE04 598 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 GPR101Q96P66 508 aaPredicted RBP18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 PUS3Q9BZE2 481 aaKnown RBP18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 DBNDD1Q9H9R9 158 aa18.76■□□□□ 0.59
CSNK1E-210ENST00000442216 EYA2O00167 538 aa18.75■□□□□ 0.59
CSNK1E-210ENST00000442216 TAF5LO75529 589 aa18.75■□□□□ 0.59
CSNK1E-210ENST00000442216 MVPQ14764 893 aaKnown RBP18.75■□□□□ 0.59
CSNK1E-210ENST00000442216 LRRC24Q50LG9 513 aa18.75■□□□□ 0.59
CSNK1E-210ENST00000442216 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
CSNK1E-210ENST00000442216 COPRSQ9NQ92 184 aa18.75■□□□□ 0.59
CSNK1E-210ENST00000442216 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 CIAO1O76071 339 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 HELBQ8NG08 1087 aaPredicted RBP18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
CSNK1E-210ENST00000442216 ZNF646O15015 1829 aaPredicted RBP18.73■□□□□ 0.59
CSNK1E-210ENST00000442216 SRGAP3O43295 1099 aa18.73■□□□□ 0.59
CSNK1E-210ENST00000442216 PLIN1O60240 522 aa18.73■□□□□ 0.59
CSNK1E-210ENST00000442216 TOMM70O94826 608 aa18.73■□□□□ 0.59
CSNK1E-210ENST00000442216 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
CSNK1E-210ENST00000442216 VGLL2Q8N8G2 317 aa18.73■□□□□ 0.59
CSNK1E-210ENST00000442216 RAD17O75943 681 aa18.72■□□□□ 0.59
CSNK1E-210ENST00000442216 PDE8BO95263 885 aa18.72■□□□□ 0.59
CSNK1E-210ENST00000442216 METTL24Q5JXM2 366 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms