RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 FAM208AQ9UK61 1670 aaKnown RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 SOS1Q07889 1333 aaPredicted RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 CCZ1BP86790 482 aa19.66■□□□□ 0.74
PMS1-213ENST00000441310 CCZ1P86791 482 aaPredicted RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 SNW1Q13573 536 aaKnown RBP19.66■□□□□ 0.74
PMS1-213ENST00000441310 ZSCAN26Q16670 478 aa19.66■□□□□ 0.74
PMS1-213ENST00000441310 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
PMS1-213ENST00000441310 LARP1BQ659C4 914 aaKnown RBP19.65■□□□□ 0.74
PMS1-213ENST00000441310 ZNF790Q6PG37 636 aa19.65■□□□□ 0.74
PMS1-213ENST00000441310 CDC37L1Q7L3B6 337 aa19.65■□□□□ 0.74
PMS1-213ENST00000441310 BICD2Q8TD16 824 aa19.65■□□□□ 0.74
PMS1-213ENST00000441310 MED1Q15648 1581 aaPredicted RBP19.65■□□□□ 0.74
PMS1-213ENST00000441310 NEMFO60524 1076 aa19.64■□□□□ 0.74
PMS1-213ENST00000441310 NR1I2O75469 434 aa19.64■□□□□ 0.74
PMS1-213ENST00000441310 ZNF496Q96IT1 587 aaPredicted RBP19.64■□□□□ 0.74
PMS1-213ENST00000441310 HOXB7P09629 217 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 PHKG2P15735 406 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 MUM1L1Q5H9M0 696 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 IL17RAQ96F46 866 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 CLSTN2Q9H4D0 955 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.73
PMS1-213ENST00000441310 CYP27B1O15528 508 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 SPATA32Q96LK8 384 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 PRDM11Q9NQV5 511 aa19.64■□□□□ 0.73
PMS1-213ENST00000441310 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
PMS1-213ENST00000441310 CDC25BP30305 580 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 SSH3Q8TE77 659 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 SPG7Q9UQ90 795 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 A0A087WWV3 80 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 LOC102724159A0A0B4J2E5 919 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 CASQ1P31415 396 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 PWP2Q15269 919 aaKnown RBP19.63■□□□□ 0.73
PMS1-213ENST00000441310 SLC52A2Q9HAB3 445 aa19.63■□□□□ 0.73
PMS1-213ENST00000441310 DDX19AQ9NUU7 478 aaKnown RBP19.63■□□□□ 0.73
PMS1-213ENST00000441310 ARGLU1Q9NWB6 273 aaPredicted RBP19.63■□□□□ 0.73
PMS1-213ENST00000441310 STRCP1A6NGW2 1772 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 TRPM3Q9HCF6 1732 aaPredicted RBP19.62■□□□□ 0.73
PMS1-213ENST00000441310 OAS2P29728 719 aaKnown RBP19.62■□□□□ 0.73
PMS1-213ENST00000441310 HYPKQ9NX55 129 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 SPATA31A3Q5VYP0 1347 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 GPS2Q13227 327 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 KSR2Q6VAB6 950 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 C11orf57Q6ZUT1 292 aaPredicted RBP19.62■□□□□ 0.73
PMS1-213ENST00000441310 RHPN1Q8TCX5 695 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 UBXN4Q92575 508 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 TOMM22Q9NS69 142 aa19.62■□□□□ 0.73
PMS1-213ENST00000441310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.62■□□□□ 0.736e-6■■□□□ 13.3
PMS1-213ENST00000441310 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 IFNL2Q8IZJ0 200 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 CCDC34Q96HJ3 373 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 STRN4Q9NRL3 753 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 MEGF6O75095 1541 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 ZRANB2O95218 330 aaKnown RBP eCLIP19.61■□□□□ 0.735e-9■□□□□ 10.7
PMS1-213ENST00000441310 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 PDRG1Q9NUG6 133 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 BECN2A8MW95 431 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 CHRM1P11229 460 aaPredicted RBP19.61■□□□□ 0.73
PMS1-213ENST00000441310 TOM1L2Q6ZVM7 507 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 JAKMIP1Q96N16 626 aaKnown RBP19.61■□□□□ 0.73
PMS1-213ENST00000441310 L2HGDHQ9H9P8 463 aa19.61■□□□□ 0.73
PMS1-213ENST00000441310 MRFAP1L1Q96HT8 127 aa19.6■□□□□ 0.73
PMS1-213ENST00000441310 KIF2AO00139 706 aaPredicted RBP19.6■□□□□ 0.73
PMS1-213ENST00000441310 ST3GAL1Q11201 340 aa19.6■□□□□ 0.73
PMS1-213ENST00000441310 CWC27Q6UX04 472 aaKnown RBP19.6■□□□□ 0.73
PMS1-213ENST00000441310 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 XAGE3Q8WTP9 111 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 EPC1Q9H2F5 836 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 YY1AP1Q9H869 796 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 SGSM2O43147 1006 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 IQCB1Q15051 598 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 ME3Q16798 604 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 TTC5Q8N0Z6 440 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 CACNA1FO60840 1977 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 PDIA6Q15084 440 aa19.59■□□□□ 0.73
PMS1-213ENST00000441310 LSG1Q9H089 658 aaKnown RBP19.59■□□□□ 0.73
PMS1-213ENST00000441310 CWC15Q9P013 229 aaKnown RBP19.59■□□□□ 0.73
PMS1-213ENST00000441310 KDM6AO15550 1401 aaPredicted RBP19.58■□□□□ 0.73
PMS1-213ENST00000441310 ICE2Q659A1 982 aa19.58■□□□□ 0.73
PMS1-213ENST00000441310 HOMER1Q86YM7 354 aa19.58■□□□□ 0.73
PMS1-213ENST00000441310 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.73
PMS1-213ENST00000441310 GEMIN8Q9NWZ8 242 aaKnown RBP19.58■□□□□ 0.73
PMS1-213ENST00000441310 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.73
PMS1-213ENST00000441310 ELP1O95163 1332 aa19.58■□□□□ 0.73
PMS1-213ENST00000441310 LMAN1P49257 510 aa19.58■□□□□ 0.72
PMS1-213ENST00000441310 E4F1Q66K89 784 aaPredicted RBP19.58■□□□□ 0.72
PMS1-213ENST00000441310 LEO1Q8WVC0 666 aaPredicted RBP19.58■□□□□ 0.72
PMS1-213ENST00000441310 PPP1R13BQ96KQ4 1090 aa19.58■□□□□ 0.72
PMS1-213ENST00000441310 SIL1Q9H173 461 aa19.58■□□□□ 0.72
PMS1-213ENST00000441310 SLAIN2Q9P270 581 aa19.58■□□□□ 0.72
PMS1-213ENST00000441310 RRP15Q9Y3B9 282 aaKnown RBP19.58■□□□□ 0.72
PMS1-213ENST00000441310 CABP4P57796 275 aa19.57■□□□□ 0.72
PMS1-213ENST00000441310 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
PMS1-213ENST00000441310 MNS1Q8NEH6 495 aa19.57■□□□□ 0.72
PMS1-213ENST00000441310 TNS3Q68CZ2 1445 aa19.57■□□□□ 0.72
PMS1-213ENST00000441310 POLA2Q14181 598 aa19.57■□□□□ 0.72
PMS1-213ENST00000441310 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
PMS1-213ENST00000441310 SCAND2PQ9GZW5 306 aaPredicted RBP19.57■□□□□ 0.72
PMS1-213ENST00000441310 SARM1Q6SZW1 724 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms