RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PCCAP05165 728 aaPredicted RBP23.46■■□□□ 1.35
GTF3A-204ENST00000438571 SAMD7Q7Z3H4 446 aa23.46■■□□□ 1.35
GTF3A-204ENST00000438571 CCDC191Q8NCU4 936 aa23.46■■□□□ 1.35
GTF3A-204ENST00000438571 METTL22Q9BUU2 404 aaPredicted RBP23.46■■□□□ 1.35
GTF3A-204ENST00000438571 PRDM10Q9NQV6 1147 aa23.46■■□□□ 1.35
GTF3A-204ENST00000438571 CASP8AP2Q9UKL3 1982 aa23.45■■□□□ 1.35
GTF3A-204ENST00000438571 ZNF408Q9H9D4 720 aa23.45■■□□□ 1.34
GTF3A-204ENST00000438571 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
GTF3A-204ENST00000438571 MAP3K2Q9Y2U5 619 aa23.45■■□□□ 1.34
GTF3A-204ENST00000438571 PDE8AO60658 829 aa23.44■■□□□ 1.34
GTF3A-204ENST00000438571 AOC2O75106 756 aa23.44■■□□□ 1.34
GTF3A-204ENST00000438571 CCDC30Q5VVM6 783 aa23.44■■□□□ 1.34
GTF3A-204ENST00000438571 IGKV5-2P06315 115 aa23.43■■□□□ 1.34
GTF3A-204ENST00000438571 TBC1D10BQ4KMP7 808 aaPredicted RBP23.43■■□□□ 1.34
GTF3A-204ENST00000438571 G2E3Q7L622 706 aa23.43■■□□□ 1.34
GTF3A-204ENST00000438571 H7C1D1 291 aa23.42■■□□□ 1.34
GTF3A-204ENST00000438571 UFL1O94874 794 aa23.42■■□□□ 1.34
GTF3A-204ENST00000438571 SAPCD2Q86UD0 394 aa23.42■■□□□ 1.34
GTF3A-204ENST00000438571 EYA3Q99504 573 aa23.42■■□□□ 1.34
GTF3A-204ENST00000438571 PODXL2Q9NZ53 605 aa23.42■■□□□ 1.34
GTF3A-204ENST00000438571 PI4KAP2A4QPH2 592 aa23.41■■□□□ 1.34
GTF3A-204ENST00000438571 MAP2K1Q02750 393 aaPredicted RBP23.41■■□□□ 1.34
GTF3A-204ENST00000438571 CCDC152Q4G0S7 254 aa23.41■■□□□ 1.34
GTF3A-204ENST00000438571 PI4KAP1Q8N8J0 262 aa23.41■■□□□ 1.34
GTF3A-204ENST00000438571 ZC3H15Q8WU90 426 aaKnown RBP23.41■■□□□ 1.34
GTF3A-204ENST00000438571 DPF2Q92785 391 aa23.41■■□□□ 1.34
GTF3A-204ENST00000438571 DDX58O95786 925 aaKnown RBP23.4■■□□□ 1.34
GTF3A-204ENST00000438571 ECE1P42892 770 aa23.4■■□□□ 1.34
GTF3A-204ENST00000438571 CWF19L2Q2TBE0 894 aaKnown RBP23.4■■□□□ 1.34
GTF3A-204ENST00000438571 USP48Q86UV5 1035 aa23.4■■□□□ 1.34
GTF3A-204ENST00000438571 WWC1Q8IX03 1113 aa23.4■■□□□ 1.34
GTF3A-204ENST00000438571 WTIPA6NIX2 430 aaPredicted RBP23.39■■□□□ 1.33
GTF3A-204ENST00000438571 RBM26Q5T8P6 1007 aaKnown RBP23.39■■□□□ 1.33
GTF3A-204ENST00000438571 KSR2Q6VAB6 950 aa23.39■■□□□ 1.33
GTF3A-204ENST00000438571 CDC37L1Q7L3B6 337 aa23.39■■□□□ 1.33
GTF3A-204ENST00000438571 ANKIB1Q9P2G1 1089 aa23.39■■□□□ 1.33
GTF3A-204ENST00000438571 TSKSQ9UJT2 592 aa23.39■■□□□ 1.33
GTF3A-204ENST00000438571 GGA1Q9UJY5 639 aa23.39■■□□□ 1.33
GTF3A-204ENST00000438571 ASTN2O75129 1339 aaPredicted RBP23.38■■□□□ 1.33
GTF3A-204ENST00000438571 ADM5C9JUS6 153 aa23.38■■□□□ 1.33
GTF3A-204ENST00000438571 CTSWP56202 376 aa23.38■■□□□ 1.33
GTF3A-204ENST00000438571 TWISTNBQ3B726 338 aaPredicted RBP23.38■■□□□ 1.33
GTF3A-204ENST00000438571 ZC3H12CQ9C0D7 883 aaKnown RBP23.38■■□□□ 1.33
GTF3A-204ENST00000438571 AKAP11Q9UKA4 1901 aa23.37■■□□□ 1.33
GTF3A-204ENST00000438571 CCDC27Q2M243 656 aa23.37■■□□□ 1.33
GTF3A-204ENST00000438571 RPS12P25398 132 aaKnown RBP23.36■■□□□ 1.33
GTF3A-204ENST00000438571 ANKRD18AQ8IVF6 992 aa23.36■■□□□ 1.33
GTF3A-204ENST00000438571 NEURL1BA8MQ27 555 aa23.35■■□□□ 1.33
GTF3A-204ENST00000438571 VIL1P09327 827 aaKnown RBP23.35■■□□□ 1.33
GTF3A-204ENST00000438571 HSP90B1P14625 803 aaKnown RBP23.35■■□□□ 1.33
GTF3A-204ENST00000438571 KIF4BQ2VIQ3 1234 aa23.35■■□□□ 1.33
GTF3A-204ENST00000438571 TTLL11Q8NHH1 800 aa23.35■■□□□ 1.33
GTF3A-204ENST00000438571 ZIC5Q96T25 663 aa23.35■■□□□ 1.33
GTF3A-204ENST00000438571 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
GTF3A-204ENST00000438571 GREM2Q9H772 168 aa23.35■■□□□ 1.33
GTF3A-204ENST00000438571 XDHP47989 1333 aa23.34■■□□□ 1.33
GTF3A-204ENST00000438571 ZNF609O15014 1411 aa23.34■■□□□ 1.33
GTF3A-204ENST00000438571 SALL2Q9Y467 1007 aaPredicted RBP23.34■■□□□ 1.33
GTF3A-204ENST00000438571 FANCIQ9NVI1 1328 aa23.33■■□□□ 1.33
GTF3A-204ENST00000438571 SLC4A2P04920 1241 aa23.33■■□□□ 1.33
GTF3A-204ENST00000438571 KRT26Q7Z3Y9 468 aa23.33■■□□□ 1.33
GTF3A-204ENST00000438571 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
GTF3A-204ENST00000438571 GGA3Q9NZ52 723 aa23.33■■□□□ 1.33
GTF3A-204ENST00000438571 G3V3G9 751 aa23.32■■□□□ 1.32
GTF3A-204ENST00000438571 DCAF8Q5TAQ9 597 aa23.32■■□□□ 1.32
GTF3A-204ENST00000438571 UBE3BQ7Z3V4 1068 aa23.32■■□□□ 1.32
GTF3A-204ENST00000438571 HHIPL1Q96JK4 782 aa23.32■■□□□ 1.32
GTF3A-204ENST00000438571 ATP2B4P23634 1241 aa23.31■■□□□ 1.32
GTF3A-204ENST00000438571 MAP2K2P36507 400 aa23.31■■□□□ 1.32
GTF3A-204ENST00000438571 HUNKP57058 714 aa23.31■■□□□ 1.32
GTF3A-204ENST00000438571 NEXNQ0ZGT2 675 aa23.31■■□□□ 1.32
GTF3A-204ENST00000438571 RSBN1LQ6PCB5 846 aaPredicted RBP23.31■■□□□ 1.32
GTF3A-204ENST00000438571 CDC5LQ99459 802 aaKnown RBP23.31■■□□□ 1.32
GTF3A-204ENST00000438571 IL16Q14005 1332 aa23.31■■□□□ 1.32
GTF3A-204ENST00000438571 FLIIQ13045 1269 aa23.3■■□□□ 1.32
GTF3A-204ENST00000438571 BEGAINQ9BUH8 593 aa23.3■■□□□ 1.32
GTF3A-204ENST00000438571 CHMP4AQ9BY43 222 aa23.3■■□□□ 1.32
GTF3A-204ENST00000438571 MINPP1Q9UNW1 487 aa23.3■■□□□ 1.32
GTF3A-204ENST00000438571 MED23Q9ULK4 1368 aa23.29■■□□□ 1.32
GTF3A-204ENST00000438571 ECM29Q5VYK3 1845 aa23.29■■□□□ 1.32
GTF3A-204ENST00000438571 H7C1W4 665 aa23.29■■□□□ 1.32
GTF3A-204ENST00000438571 DCPSQ96C86 337 aaKnown RBP23.29■■□□□ 1.32
GTF3A-204ENST00000438571 GMLQ99445 158 aa23.29■■□□□ 1.32
GTF3A-204ENST00000438571 SCAF8Q9UPN6 1271 aaKnown RBP23.29■■□□□ 1.32
GTF3A-204ENST00000438571 PAPPA2Q9BXP8 1791 aa23.28■■□□□ 1.32
GTF3A-204ENST00000438571 CASP7P55210 303 aa23.28■■□□□ 1.32
GTF3A-204ENST00000438571 ZNF280AP59817 542 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-204ENST00000438571 MXD3Q9BW11 206 aa23.28■■□□□ 1.32
GTF3A-204ENST00000438571 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-204ENST00000438571 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-204ENST00000438571 KLRK1P26718 216 aa23.27■■□□□ 1.32
GTF3A-204ENST00000438571 GCKRQ14397 625 aa23.27■■□□□ 1.32
GTF3A-204ENST00000438571 FAM161AQ3B820 660 aa23.27■■□□□ 1.32
GTF3A-204ENST00000438571 ANGEL2Q5VTE6 544 aaKnown RBP23.27■■□□□ 1.32
GTF3A-204ENST00000438571 TXNRD3Q86VQ6 643 aa23.27■■□□□ 1.32
GTF3A-204ENST00000438571 AGBL3Q8NEM8 1001 aa23.27■■□□□ 1.32
GTF3A-204ENST00000438571 ABHD8Q96I13 439 aa23.27■■□□□ 1.32
GTF3A-204ENST00000438571 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
GTF3A-204ENST00000438571 FAM155AB1AL88 458 aaPredicted RBP23.26■■□□□ 1.31
GTF3A-204ENST00000438571 CCT4P50991 539 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms