RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 CALM1P0DP23 149 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 CALM2P0DP24 149 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 CALM3P0DP25 149 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 MCM5P33992 734 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 EHBP1Q8NDI1 1231 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 CCDC114Q96M63 670 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
SEC16A-206ENST00000431893 PLCB3Q01970 1234 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 UBXN1Q04323 297 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 STX8Q9UNK0 236 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 ADAMTS2O95450 1211 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 RXRAP19793 462 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 ASIC1P78348 528 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 ECHDC1Q9NTX5 307 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 OPA1O60313 960 aa13□□□□□ -0.33
SEC16A-206ENST00000431893 U2AF2P26368 475 aaKnown RBP eCLIP13□□□□□ -0.331e-7■□□□□ 10.5
SEC16A-206ENST00000431893 NDC80O14777 642 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 FBLN1P23142 703 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 PICALMQ13492 652 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 AQRO60306 1485 aaKnown RBP eCLIP12.99□□□□□ -0.332e-7■■■■■ 36.4
SEC16A-206ENST00000431893 SDSP20132 328 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 SMC6Q96SB8 1091 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 HPDP32754 393 aaPredicted RBP12.99□□□□□ -0.33
SEC16A-206ENST00000431893 KIF5BP33176 963 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 KANK3Q6NY19 840 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 CEP83Q9Y592 693 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 SLU7O95391 586 aaKnown RBP12.99□□□□□ -0.33
SEC16A-206ENST00000431893 IRX5P78411 483 aaPredicted RBP12.99□□□□□ -0.33
SEC16A-206ENST00000431893 WTAPQ15007 396 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 MAP7D1Q3KQU3 841 aa12.99□□□□□ -0.33
SEC16A-206ENST00000431893 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
SEC16A-206ENST00000431893 LRPPRCP42704 1394 aaKnown RBP12.98□□□□□ -0.33
SEC16A-206ENST00000431893 TSPY3P0CV98 308 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 TSPY8P0CW00 308 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 LDHAL6AQ6ZMR3 332 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 SREK1Q8WXA9 508 aaKnown RBP12.98□□□□□ -0.33
SEC16A-206ENST00000431893 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 NBPF11Q86T75 865 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 RMND1Q9NWS8 449 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 IFNKQ9P0W0 207 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 TACC1O75410 805 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 STXBP4Q6ZWJ1 553 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 PDE4BQ07343 736 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 FERMT1Q9BQL6 677 aa12.98□□□□□ -0.33
SEC16A-206ENST00000431893 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 IGF1RP08069 1367 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 ANAPC4Q9UJX5 808 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
SEC16A-206ENST00000431893 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
SEC16A-206ENST00000431893 MCM7P33993 719 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 PPP1R7Q15435 360 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
SEC16A-206ENST00000431893 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 DTNBO60941 627 aa12.97□□□□□ -0.33
SEC16A-206ENST00000431893 TYRO3Q06418 890 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 LONRF3Q496Y0 759 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 RPUSD2Q8IZ73 545 aaKnown RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 RBM8AQ9Y5S9 174 aaKnown RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 ZBTB43O43298 467 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 CCT6AP40227 531 aaKnown RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 CCDC65Q8IXS2 484 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 CTAGE1Q96RT6 745 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 NAIPQ13075 1403 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 VGLL3A8MV65 326 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
SEC16A-206ENST00000431893 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-206ENST00000431893 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.34
SEC16A-206ENST00000431893 EBAG9O00559 213 aa12.96□□□□□ -0.34
SEC16A-206ENST00000431893 RTN1Q16799 776 aa12.96□□□□□ -0.34
SEC16A-206ENST00000431893 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.34
SEC16A-206ENST00000431893 ZSCAN16Q9H4T2 348 aaPredicted RBP12.96□□□□□ -0.34
SEC16A-206ENST00000431893 F13A1P00488 732 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 ERCC3P19447 782 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 GRM1Q13255 1194 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 PLEKHA4Q9H4M7 779 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 CASKIN1Q8WXD9 1431 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
SEC16A-206ENST00000431893 FAM200AQ8TCP9 573 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 RAPGEF1Q13905 1077 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 CLCN1P35523 988 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 ZGPATQ8N5A5 531 aaKnown RBP12.95□□□□□ -0.34
SEC16A-206ENST00000431893 ARID4AP29374 1257 aaPredicted RBP12.95□□□□□ -0.34
SEC16A-206ENST00000431893 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
SEC16A-206ENST00000431893 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■□□□□ 10.3
SEC16A-206ENST00000431893 CTNND2Q9UQB3 1225 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms