RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 APLP1P51693 650 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 FOXO4P98177 505 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 CXCL9Q07325 125 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 TNIP1Q15025 636 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-207ENST00000430858 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 ZC3H12CQ9C0D7 883 aaKnown RBP12.41□□□□□ -0.42
HDAC6-207ENST00000430858 MINPP1Q9UNW1 487 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 UTYO14607 1347 aa12.4□□□□□ -0.42
HDAC6-207ENST00000430858 RIMBP2O15034 1052 aa12.4□□□□□ -0.42
HDAC6-207ENST00000430858 SCNN1DP51172 638 aa12.4□□□□□ -0.42
HDAC6-207ENST00000430858 IFIT5Q13325 482 aaKnown RBP12.4□□□□□ -0.42
HDAC6-207ENST00000430858 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
HDAC6-207ENST00000430858 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
HDAC6-207ENST00000430858 SCN4AP35499 1836 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 YDJCA8MPS7 323 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 RAD17O75943 681 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
HDAC6-207ENST00000430858 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-207ENST00000430858 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 DBNDD1Q9H9R9 158 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 NOB1Q9ULX3 412 aaKnown RBP12.39□□□□□ -0.43
HDAC6-207ENST00000430858 CHMP3Q9Y3E7 222 aa12.39□□□□□ -0.43
HDAC6-207ENST00000430858 LTBP1Q14766 1721 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 G3V3G9 751 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 ECE2O60344 883 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-207ENST00000430858 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 EPS15P42566 896 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
HDAC6-207ENST00000430858 EPHA10Q5JZY3 1008 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-207ENST00000430858 API5Q9BZZ5 524 aaKnown RBP12.38□□□□□ -0.43
HDAC6-207ENST00000430858 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 MYH3P11055 1940 aa12.38□□□□□ -0.43
HDAC6-207ENST00000430858 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
HDAC6-207ENST00000430858 GMPSP49915 693 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-207ENST00000430858 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
HDAC6-207ENST00000430858 USP50Q70EL3 339 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-207ENST00000430858 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 PSMD14O00487 310 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 DPF2Q92785 391 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 KAZALD1Q96I82 304 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 USP44Q9H0E7 712 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 ADARB2Q9NS39 739 aaKnown RBP12.36□□□□□ -0.43
HDAC6-207ENST00000430858 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
HDAC6-207ENST00000430858 IPO8O15397 1037 aaKnown RBP12.35□□□□□ -0.43
HDAC6-207ENST00000430858 RPS12P25398 132 aaKnown RBP12.35□□□□□ -0.43
HDAC6-207ENST00000430858 CHRNDQ07001 517 aa12.35□□□□□ -0.43
HDAC6-207ENST00000430858 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-207ENST00000430858 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
HDAC6-207ENST00000430858 BICC1Q9H694 974 aaKnown RBP12.35□□□□□ -0.43
HDAC6-207ENST00000430858 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
HDAC6-207ENST00000430858 H7C1D1 291 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 VIL1P09327 827 aaKnown RBP12.34□□□□□ -0.43
HDAC6-207ENST00000430858 KCNJ4P48050 445 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 COA1Q9GZY4 146 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
HDAC6-207ENST00000430858 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
HDAC6-207ENST00000430858 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-207ENST00000430858 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-207ENST00000430858 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-207ENST00000430858 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
HDAC6-207ENST00000430858 ANKRD44Q8N8A2 993 aa12.33□□□□□ -0.44
HDAC6-207ENST00000430858 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-207ENST00000430858 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
HDAC6-207ENST00000430858 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
HDAC6-207ENST00000430858 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 TAF5LO75529 589 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 BCAR3O75815 825 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 UBTFL1P0CB47 393 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-207ENST00000430858 HTRA3P83110 453 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 MAP1SQ66K74 1059 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-207ENST00000430858 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-207ENST00000430858 C15orf52Q6ZUT6 534 aaKnown RBP12.32□□□□□ -0.44
HDAC6-207ENST00000430858 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 AGBL3Q8NEM8 1001 aa12.32□□□□□ -0.44
HDAC6-207ENST00000430858 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
HDAC6-207ENST00000430858 ZNF609O15014 1411 aa12.31□□□□□ -0.44
HDAC6-207ENST00000430858 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
HDAC6-207ENST00000430858 ATF7IPQ6VMQ6 1270 aa12.31□□□□□ -0.44
HDAC6-207ENST00000430858 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
HDAC6-207ENST00000430858 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-207ENST00000430858 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms