RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 BRF1Q92994 677 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 GREM2Q9H772 168 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 SH2B1Q9NRF2 756 aaPredicted RBP13.03□□□□□ -0.32
DDX56-203ENST00000421223 RPAP1Q9BWH6 1393 aaPredicted RBP13.03□□□□□ -0.32
DDX56-203ENST00000421223 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.32
DDX56-203ENST00000421223 MPNDQ8N594 471 aa13.02□□□□□ -0.32
DDX56-203ENST00000421223 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.32
DDX56-203ENST00000421223 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.32
DDX56-203ENST00000421223 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.32
DDX56-203ENST00000421223 COL15A1P39059 1388 aa13.02□□□□□ -0.32
DDX56-203ENST00000421223 ZNF609O15014 1411 aa13.02□□□□□ -0.32
DDX56-203ENST00000421223 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
DDX56-203ENST00000421223 SNAP23O00161 211 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 IRS4O14654 1257 aaPredicted RBP13.02□□□□□ -0.33
DDX56-203ENST00000421223 JAK2O60674 1132 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
DDX56-203ENST00000421223 ITGA6P23229 1130 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 KCNQ4P56696 695 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 SCARF1Q14162 830 aa13.02□□□□□ -0.33
DDX56-203ENST00000421223 CCT2P78371 535 aaKnown RBP13.01□□□□□ -0.33
DDX56-203ENST00000421223 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
DDX56-203ENST00000421223 ZNF445P59923 1031 aa13.01□□□□□ -0.33
DDX56-203ENST00000421223 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
DDX56-203ENST00000421223 GIGYF2Q6Y7W6 1299 aaKnown RBP13.01□□□□□ -0.33
DDX56-203ENST00000421223 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
DDX56-203ENST00000421223 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
DDX56-203ENST00000421223 MED23Q9ULK4 1368 aa13.01□□□□□ -0.33
DDX56-203ENST00000421223 MRC1P22897 1456 aa13.01□□□□□ -0.33
DDX56-203ENST00000421223 MAP3K15Q6ZN16 1313 aa13□□□□□ -0.33
DDX56-203ENST00000421223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
DDX56-203ENST00000421223 ZAP70P43403 619 aa13□□□□□ -0.33
DDX56-203ENST00000421223 CEBPZQ03701 1054 aaKnown RBP13□□□□□ -0.33
DDX56-203ENST00000421223 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
DDX56-203ENST00000421223 NLRP10Q86W26 655 aa13□□□□□ -0.33
DDX56-203ENST00000421223 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
DDX56-203ENST00000421223 IL17RAQ96F46 866 aa13□□□□□ -0.33
DDX56-203ENST00000421223 ADAMTS7Q9UKP4 1686 aa13□□□□□ -0.33
DDX56-203ENST00000421223 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
DDX56-203ENST00000421223 ANKRD1Q15327 319 aa13□□□□□ -0.33
DDX56-203ENST00000421223 DDB1Q16531 1140 aa13□□□□□ -0.33
DDX56-203ENST00000421223 HMG20BQ9P0W2 317 aa13□□□□□ -0.33
DDX56-203ENST00000421223 ATP6V1DQ9Y5K8 247 aa13□□□□□ -0.33
DDX56-203ENST00000421223 AFDNP55196 1824 aaKnown RBP13□□□□□ -0.33
DDX56-203ENST00000421223 APPP05067 770 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
DDX56-203ENST00000421223 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 ATP2B3Q16720 1220 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
DDX56-203ENST00000421223 RNF113AO15541 343 aaKnown RBP12.99□□□□□ -0.33
DDX56-203ENST00000421223 IDH1O75874 414 aaKnown RBP12.99□□□□□ -0.33
DDX56-203ENST00000421223 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 KRT32Q14532 448 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 LRSAM1Q6UWE0 723 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 STOX1Q6ZVD7 989 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
DDX56-203ENST00000421223 ANKRD18BA2A2Z9 1011 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 H3BQV1 296 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 M0R2C6 588 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 KDM4AO75164 1064 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 KCNB2Q92953 911 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
DDX56-203ENST00000421223 HSPD1P10809 573 aaKnown RBP12.98□□□□□ -0.33
DDX56-203ENST00000421223 SMIM5Q71RC9 77 aa12.98□□□□□ -0.33
DDX56-203ENST00000421223 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
DDX56-203ENST00000421223 NCOA5Q9HCD5 579 aaKnown RBP12.98□□□□□ -0.33
DDX56-203ENST00000421223 MAST3O60307 1309 aa12.98□□□□□ -0.33
DDX56-203ENST00000421223 GOLGA6L4A6NEF3 574 aa12.98□□□□□ -0.33
DDX56-203ENST00000421223 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
DDX56-203ENST00000421223 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 ESPNB1AK53 854 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
DDX56-203ENST00000421223 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 CTSWP56202 376 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 CAMK4Q16566 473 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 ZMYM1Q5SVZ6 1142 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
DDX56-203ENST00000421223 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.33
DDX56-203ENST00000421223 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.33
DDX56-203ENST00000421223 CRYBG1Q9Y4K1 1723 aa12.96□□□□□ -0.33
DDX56-203ENST00000421223 CIAO1O76071 339 aa12.96□□□□□ -0.33
DDX56-203ENST00000421223 HELLSQ9NRZ9 838 aa12.96□□□□□ -0.33
DDX56-203ENST00000421223 TCHHQ07283 1943 aa12.96□□□□□ -0.33
DDX56-203ENST00000421223 E7EWF7 191 aa12.96□□□□□ -0.34
DDX56-203ENST00000421223 KCNQ2O43526 872 aa12.96□□□□□ -0.34
DDX56-203ENST00000421223 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.34
DDX56-203ENST00000421223 PUS7LQ9H0K6 701 aaKnown RBP12.96□□□□□ -0.34
DDX56-203ENST00000421223 GPR108Q9NPR9 543 aa12.96□□□□□ -0.34
DDX56-203ENST00000421223 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.34
DDX56-203ENST00000421223 PDCP20941 246 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms