RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ADAMTSL3P82987 1691 aa17.08■□□□□ 0.33
CHRD-204ENST00000420973 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.33
CHRD-204ENST00000420973 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.32
CHRD-204ENST00000420973 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
CHRD-204ENST00000420973 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
CHRD-204ENST00000420973 CT47A1Q5JQC4 288 aaPredicted RBP17.08■□□□□ 0.32
CHRD-204ENST00000420973 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
CHRD-204ENST00000420973 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
CHRD-204ENST00000420973 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
CHRD-204ENST00000420973 ZKSCAN1P17029 563 aaPredicted RBP17.07■□□□□ 0.32
CHRD-204ENST00000420973 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
CHRD-204ENST00000420973 OSBPL3Q9H4L5 887 aa17.07■□□□□ 0.32
CHRD-204ENST00000420973 CCDC24Q8N4L8 307 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 ZNF592Q92610 1267 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 C8orf37Q96NL8 207 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 SGSM2O43147 1006 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
CHRD-204ENST00000420973 NCAPGQ9BPX3 1015 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
CHRD-204ENST00000420973 CTNNA3Q9UI47 895 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
CHRD-204ENST00000420973 CEP83Q9Y592 693 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 STARD3NLO95772 234 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
CHRD-204ENST00000420973 ICE2Q659A1 982 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 ST7Q9NRC1 585 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 SNAP23O00161 211 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 NOL10Q9BSC4 688 aaKnown RBP17.05■□□□□ 0.32
CHRD-204ENST00000420973 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
CHRD-204ENST00000420973 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
CHRD-204ENST00000420973 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 DDX41Q9UJV9 622 aaKnown RBP17.04■□□□□ 0.32
CHRD-204ENST00000420973 CHST3Q7LGC8 479 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 GOLGA6L1Q8N7Z2 621 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 AK2P54819 239 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
CHRD-204ENST00000420973 ANKRD7Q92527 254 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 SNX14Q9Y5W7 946 aa17.04■□□□□ 0.32
CHRD-204ENST00000420973 GOLGB1Q14789 3259 aaKnown RBP17.03■□□□□ 0.32
CHRD-204ENST00000420973 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
CHRD-204ENST00000420973 HLFQ16534 295 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.03■□□□□ 0.324e-7■■□□□ 13.4
CHRD-204ENST00000420973 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
CHRD-204ENST00000420973 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 FIBPO43427 364 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
CHRD-204ENST00000420973 TDO2P48775 406 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 HAND2P61296 217 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
CHRD-204ENST00000420973 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 LRSAM1Q6UWE0 723 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 EVI5LQ96CN4 794 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
CHRD-204ENST00000420973 NUCB2P80303 420 aa17.02■□□□□ 0.32
CHRD-204ENST00000420973 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
CHRD-204ENST00000420973 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
CHRD-204ENST00000420973 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
CHRD-204ENST00000420973 NGLY1Q96IV0 654 aa17.02■□□□□ 0.32
CHRD-204ENST00000420973 PDRG1Q9NUG6 133 aa17.02■□□□□ 0.32
CHRD-204ENST00000420973 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.02■□□□□ 0.323e-6■■□□□ 13.2
CHRD-204ENST00000420973 V9GYY5 206 aaPredicted RBP17.02■□□□□ 0.32
CHRD-204ENST00000420973 TRIM66O15016 1216 aa17.02■□□□□ 0.32
CHRD-204ENST00000420973 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
CHRD-204ENST00000420973 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
CHRD-204ENST00000420973 CCDC172P0C7W6 258 aa17.02■□□□□ 0.31
CHRD-204ENST00000420973 HEG1Q9ULI3 1381 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 DDB1Q16531 1140 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
CHRD-204ENST00000420973 SALL3Q9BXA9 1300 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 SPC24Q8NBT2 197 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 DEF6Q9H4E7 631 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
CHRD-204ENST00000420973 ATP6V1AP38606 617 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 LDHAL6AQ6ZMR3 332 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 FAM212AQ96EL1 285 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 CYP46A1Q9Y6A2 500 aa17.01■□□□□ 0.31
CHRD-204ENST00000420973 SOS2Q07890 1332 aaPredicted RBP17■□□□□ 0.31
CHRD-204ENST00000420973 NEK11Q8NG66 645 aa17■□□□□ 0.31
CHRD-204ENST00000420973 E2F4Q16254 413 aa17■□□□□ 0.31
CHRD-204ENST00000420973 TTC39AQ5SRH9 613 aa17■□□□□ 0.31
CHRD-204ENST00000420973 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
CHRD-204ENST00000420973 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
CHRD-204ENST00000420973 FAM173BQ6P4H8 233 aa16.99■□□□□ 0.31
CHRD-204ENST00000420973 CTR9Q6PD62 1173 aa16.99■□□□□ 0.31
CHRD-204ENST00000420973 C16orf45Q96MC5 204 aaPredicted RBP16.99■□□□□ 0.31
CHRD-204ENST00000420973 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
CHRD-204ENST00000420973 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
CHRD-204ENST00000420973 POLR3GO15318 223 aaPredicted RBP16.99■□□□□ 0.31
CHRD-204ENST00000420973 LARGE1O95461 756 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms