RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 GADD45BO75293 160 aaPredicted RBP22.6■■□□□ 1.21
CROCCP3-202ENST00000420820 ZMYM1Q5SVZ6 1142 aa22.6■■□□□ 1.21
CROCCP3-202ENST00000420820 NECAB1Q8N987 351 aa22.6■■□□□ 1.21
CROCCP3-202ENST00000420820 MYH3P11055 1940 aa22.6■■□□□ 1.21
CROCCP3-202ENST00000420820 NUP98P52948 1817 aa22.6■■□□□ 1.21
CROCCP3-202ENST00000420820 RBSNQ9H1K0 784 aa22.59■■□□□ 1.21
CROCCP3-202ENST00000420820 CEP126Q9P2H0 1117 aa22.59■■□□□ 1.21
CROCCP3-202ENST00000420820 ATP6V1DQ9Y5K8 247 aa22.59■■□□□ 1.21
CROCCP3-202ENST00000420820 CYP21A2P08686 494 aa22.59■■□□□ 1.21
CROCCP3-202ENST00000420820 FAM89AQ96GI7 184 aa22.59■■□□□ 1.21
CROCCP3-202ENST00000420820 GDPD2Q9HCC8 539 aa22.59■■□□□ 1.21
CROCCP3-202ENST00000420820 CCDC173Q0VFZ6 552 aa22.58■■□□□ 1.21
CROCCP3-202ENST00000420820 HLFQ16534 295 aa22.58■■□□□ 1.21
CROCCP3-202ENST00000420820 NLRP10Q86W26 655 aa22.58■■□□□ 1.21
CROCCP3-202ENST00000420820 NEK1Q96PY6 1258 aa22.58■■□□□ 1.21
CROCCP3-202ENST00000420820 DSCC1Q9BVC3 393 aa22.58■■□□□ 1.21
CROCCP3-202ENST00000420820 IFIT1P09914 478 aaKnown RBP22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 HSP90AB3PQ58FF7 597 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 CNPY2Q9Y2B0 182 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 AKAP2Q9Y2D5 859 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 DOT1LQ8TEK3 1739 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 SYCE3A1L190 88 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 EXOC5O00471 708 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 FOXD4L6Q3SYB3 417 aaPredicted RBP22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 FOXD4L3Q6VB84 417 aaPredicted RBP22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 TCEANC2Q96MN5 208 aa22.57■■□□□ 1.2
CROCCP3-202ENST00000420820 UBAP1LF5GYI3 381 aa22.56■■□□□ 1.2
CROCCP3-202ENST00000420820 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
CROCCP3-202ENST00000420820 NRAPQ86VF7 1730 aa22.56■■□□□ 1.2
CROCCP3-202ENST00000420820 RIC1Q4ADV7 1423 aa22.56■■□□□ 1.2
CROCCP3-202ENST00000420820 PIP4K2BP78356 416 aa22.55■■□□□ 1.2
CROCCP3-202ENST00000420820 SYAP1Q96A49 352 aaPredicted RBP22.55■■□□□ 1.2
CROCCP3-202ENST00000420820 ABCC12Q96J65 1359 aa22.55■■□□□ 1.2
CROCCP3-202ENST00000420820 RNF113AO15541 343 aaKnown RBP22.55■■□□□ 1.2
CROCCP3-202ENST00000420820 IFIT5Q13325 482 aaKnown RBP22.55■■□□□ 1.2
CROCCP3-202ENST00000420820 SLFNL1Q499Z3 407 aa22.54■■□□□ 1.2
CROCCP3-202ENST00000420820 XAGE2Q96GT9 111 aa22.54■■□□□ 1.2
CROCCP3-202ENST00000420820 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
CROCCP3-202ENST00000420820 RIPOR2Q9Y4F9 1068 aa22.54■■□□□ 1.2
CROCCP3-202ENST00000420820 ERVV-1B6SEH8 477 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 UBE2HP62256 183 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 STOX1Q6ZVD7 989 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 TTLL11Q8NHH1 800 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 MAST3O60307 1309 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 PDCP20941 246 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 ADORA1P30542 326 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 SYNE4Q8N205 404 aa22.53■■□□□ 1.2
CROCCP3-202ENST00000420820 MYH7P12883 1935 aa22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 KAT6BQ8WYB5 2073 aa22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 HSPD1P10809 573 aaKnown RBP22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 IL6STP40189 918 aaPredicted RBP22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 CCDC158Q5M9N0 1113 aa22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 LARP1BQ659C4 914 aaKnown RBP22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 CDCA7Q9BWT1 371 aaPredicted RBP22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 AKAP11Q9UKA4 1901 aa22.52■■□□□ 1.2
CROCCP3-202ENST00000420820 DTNBO60941 627 aa22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 HMGB1P09429 215 aaKnown RBP22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 GTF3C6Q969F1 213 aa22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 CICQ96RK0 1608 aaPredicted RBP22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 GPTP24298 496 aa22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 CTSWP56202 376 aa22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 AGXT2Q9BYV1 514 aa22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 RREB1Q92766 1687 aa22.51■■□□□ 1.19
CROCCP3-202ENST00000420820 DNM1Q05193 864 aaKnown RBP22.5■■□□□ 1.19
CROCCP3-202ENST00000420820 Q6ZUG5 572 aa22.5■■□□□ 1.19
CROCCP3-202ENST00000420820 PDLIM2Q96JY6 352 aa22.5■■□□□ 1.19
CROCCP3-202ENST00000420820 GREM2Q9H772 168 aa22.5■■□□□ 1.19
CROCCP3-202ENST00000420820 LRP5O75197 1615 aa22.5■■□□□ 1.19
CROCCP3-202ENST00000420820 PHF14O94880 888 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 CSPP1Q1MSJ5 1256 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 TTC39AQ5SRH9 613 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 KLHL34Q8N239 644 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 ANP32BQ92688 251 aaKnown RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 NWD2Q9ULI1 1742 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 VPS37CA5D8V6 355 aaPredicted RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 M0R2C6 588 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 ZFYP08048 801 aaPredicted RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 ITGA6P23229 1130 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 EXOSC10Q01780 885 aaKnown RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 TAF7LQ5H9L4 462 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 DHX32Q7L7V1 743 aaKnown RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 ZNF34Q8IZ26 560 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 VGLL2Q8N8G2 317 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 OSBP2Q969R2 916 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 CCDC85AQ96PX6 553 aaPredicted RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 THRAP3Q9Y2W1 955 aaKnown RBP22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 SPATA31A1Q5TZJ5 1347 aa22.49■■□□□ 1.19
CROCCP3-202ENST00000420820 SLIT2O94813 1529 aa22.48■■□□□ 1.19
CROCCP3-202ENST00000420820 CLCN1P35523 988 aa22.48■■□□□ 1.19
CROCCP3-202ENST00000420820 SCARF1Q14162 830 aa22.48■■□□□ 1.19
CROCCP3-202ENST00000420820 LRRFIP1Q32MZ4 808 aaKnown RBP22.48■■□□□ 1.19
CROCCP3-202ENST00000420820 CDC37L1Q7L3B6 337 aa22.48■■□□□ 1.19
CROCCP3-202ENST00000420820 ZNF512BQ96KM6 892 aaPredicted RBP22.48■■□□□ 1.19
CROCCP3-202ENST00000420820 IRS4O14654 1257 aaPredicted RBP22.47■■□□□ 1.19
CROCCP3-202ENST00000420820 CCDC183Q5T5S1 534 aa22.47■■□□□ 1.19
CROCCP3-202ENST00000420820 ANKRD18BA2A2Z9 1011 aa22.47■■□□□ 1.19
CROCCP3-202ENST00000420820 ESPNB1AK53 854 aa22.47■■□□□ 1.19
CROCCP3-202ENST00000420820 FIBPO43427 364 aa22.47■■□□□ 1.19
CROCCP3-202ENST00000420820 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms