RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 CDCA5Q96FF9 252 aa18.1■□□□□ 0.49
SSB-204ENST00000417292 C6orf229H3BNL8 230 aa18.09■□□□□ 0.49
SSB-204ENST00000417292 SCN9AQ15858 1988 aa18.09■□□□□ 0.49
SSB-204ENST00000417292 CENPFP49454 3210 aa18.09■□□□□ 0.49
SSB-204ENST00000417292 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
SSB-204ENST00000417292 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
SSB-204ENST00000417292 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
SSB-204ENST00000417292 TBC1D16Q8TBP0 767 aa18.07■□□□□ 0.48
SSB-204ENST00000417292 ANGEL2Q5VTE6 544 aaKnown RBP18.06■□□□□ 0.48
SSB-204ENST00000417292 ZNF296Q8WUU4 475 aaPredicted RBP18.06■□□□□ 0.48
SSB-204ENST00000417292 FAM89AQ96GI7 184 aa18.06■□□□□ 0.48
SSB-204ENST00000417292 TBC1D8O95759 1140 aa18.05■□□□□ 0.48
SSB-204ENST00000417292 MOB2Q70IA6 237 aa18.05■□□□□ 0.48
SSB-204ENST00000417292 EYA3Q99504 573 aa18.05■□□□□ 0.48
SSB-204ENST00000417292 BRCA2P51587 3418 aa18.04■□□□□ 0.48
SSB-204ENST00000417292 ZNF280AP59817 542 aaPredicted RBP18.04■□□□□ 0.48
SSB-204ENST00000417292 SCARF1Q14162 830 aa18.04■□□□□ 0.48
SSB-204ENST00000417292 PKN2Q16513 984 aaKnown RBP18.04■□□□□ 0.48
SSB-204ENST00000417292 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
SSB-204ENST00000417292 FKBP1BP68106 108 aa18.03■□□□□ 0.48
SSB-204ENST00000417292 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
SSB-204ENST00000417292 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
SSB-204ENST00000417292 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
SSB-204ENST00000417292 ZC3H12CQ9C0D7 883 aaKnown RBP18.03■□□□□ 0.48
SSB-204ENST00000417292 HDAC9Q9UKV0 1011 aa18.03■□□□□ 0.48
SSB-204ENST00000417292 SCAF8Q9UPN6 1271 aaKnown RBP18.03■□□□□ 0.48
SSB-204ENST00000417292 PAPPA2Q9BXP8 1791 aa18.03■□□□□ 0.48
SSB-204ENST00000417292 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.48
SSB-204ENST00000417292 RPS8P62241 208 aaKnown RBP18.02■□□□□ 0.48
SSB-204ENST00000417292 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
SSB-204ENST00000417292 ZNF609O15014 1411 aa18.01■□□□□ 0.47
SSB-204ENST00000417292 RIPK4P57078 832 aa18.01■□□□□ 0.47
SSB-204ENST00000417292 RSBN1LQ6PCB5 846 aaPredicted RBP18.01■□□□□ 0.47
SSB-204ENST00000417292 PODXL2Q9NZ53 605 aa18.01■□□□□ 0.47
SSB-204ENST00000417292 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
SSB-204ENST00000417292 UBE2Q2LH0YL09 131 aa18■□□□□ 0.47
SSB-204ENST00000417292 PRAMEF18Q5VWM3 479 aa18■□□□□ 0.47
SSB-204ENST00000417292 AGBL3Q8NEM8 1001 aa18■□□□□ 0.47
SSB-204ENST00000417292 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
SSB-204ENST00000417292 GMLQ99445 158 aa18■□□□□ 0.47
SSB-204ENST00000417292 GPR25O00155 361 aa17.99■□□□□ 0.47
SSB-204ENST00000417292 UFL1O94874 794 aa17.99■□□□□ 0.47
SSB-204ENST00000417292 TM4SF4P48230 202 aa17.99■□□□□ 0.47
SSB-204ENST00000417292 FBXO46Q6PJ61 603 aaPredicted RBP17.99■□□□□ 0.47
SSB-204ENST00000417292 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
SSB-204ENST00000417292 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
SSB-204ENST00000417292 MYOZ2Q9NPC6 264 aa17.99■□□□□ 0.47
SSB-204ENST00000417292 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
SSB-204ENST00000417292 PITPNM2Q9BZ72 1349 aa17.98■□□□□ 0.47
SSB-204ENST00000417292 IRS4O14654 1257 aaPredicted RBP17.98■□□□□ 0.47
SSB-204ENST00000417292 PSME4Q14997 1843 aa17.98■□□□□ 0.47
SSB-204ENST00000417292 G3V3G9 751 aa17.97■□□□□ 0.47
SSB-204ENST00000417292 USP17L8P0C7I0 530 aa17.97■□□□□ 0.47
SSB-204ENST00000417292 NOM1Q5C9Z4 860 aaKnown RBP17.97■□□□□ 0.47
SSB-204ENST00000417292 DCAF8Q5TAQ9 597 aa17.97■□□□□ 0.47
SSB-204ENST00000417292 R3HDMLQ9H3Y0 253 aa17.97■□□□□ 0.47
SSB-204ENST00000417292 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
SSB-204ENST00000417292 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
SSB-204ENST00000417292 MKRN3Q13064 507 aaKnown RBP17.96■□□□□ 0.47
SSB-204ENST00000417292 CHL1O00533 1208 aa17.95■□□□□ 0.46
SSB-204ENST00000417292 TMPOP42166 694 aaKnown RBP17.95■□□□□ 0.46
SSB-204ENST00000417292 TRIM28Q13263 835 aaKnown RBP17.95■□□□□ 0.46
SSB-204ENST00000417292 NBPF9Q3BBW0 867 aa17.95■□□□□ 0.46
SSB-204ENST00000417292 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
SSB-204ENST00000417292 HABP4Q5JVS0 413 aaKnown RBP17.94■□□□□ 0.46
SSB-204ENST00000417292 HDGFL1Q5TGJ6 251 aa17.94■□□□□ 0.46
SSB-204ENST00000417292 USP17L3A6NCW0 530 aa17.93■□□□□ 0.46
SSB-204ENST00000417292 USP17L4A6NCW7 530 aa17.93■□□□□ 0.46
SSB-204ENST00000417292 FKTNO75072 461 aa17.93■□□□□ 0.46
SSB-204ENST00000417292 TTLL12Q14166 644 aaPredicted RBP17.93■□□□□ 0.46
SSB-204ENST00000417292 USP17L1Q7RTZ2 530 aa17.93■□□□□ 0.46
SSB-204ENST00000417292 CFHR5Q9BXR6 569 aa17.93■□□□□ 0.46
SSB-204ENST00000417292 DBF4Q9UBU7 674 aaPredicted RBP17.93■□□□□ 0.46
SSB-204ENST00000417292 WTIPA6NIX2 430 aaPredicted RBP17.92■□□□□ 0.46
SSB-204ENST00000417292 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
SSB-204ENST00000417292 ZBTB38Q8NAP3 1195 aaPredicted RBP17.92■□□□□ 0.46
SSB-204ENST00000417292 MXD3Q9BW11 206 aa17.92■□□□□ 0.46
SSB-204ENST00000417292 PTPN12Q05209 780 aaKnown RBP17.91■□□□□ 0.46
SSB-204ENST00000417292 SREBF2Q12772 1141 aa17.91■□□□□ 0.46
SSB-204ENST00000417292 PODNQ7Z5L7 613 aa17.91■□□□□ 0.46
SSB-204ENST00000417292 CCDC85AQ96PX6 553 aaPredicted RBP17.91■□□□□ 0.46
SSB-204ENST00000417292 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
SSB-204ENST00000417292 XDHP47989 1333 aa17.91■□□□□ 0.46
SSB-204ENST00000417292 POTEFA5A3E0 1075 aa17.9■□□□□ 0.46
SSB-204ENST00000417292 WNT10BO00744 389 aa17.9■□□□□ 0.46
SSB-204ENST00000417292 HYPKQ9NX55 129 aa17.9■□□□□ 0.46
SSB-204ENST00000417292 ZNF646O15015 1829 aaPredicted RBP17.89■□□□□ 0.45
SSB-204ENST00000417292 HOXB7P09629 217 aa17.89■□□□□ 0.45
SSB-204ENST00000417292 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
SSB-204ENST00000417292 CCDC152Q4G0S7 254 aa17.89■□□□□ 0.45
SSB-204ENST00000417292 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
SSB-204ENST00000417292 JARID2Q92833 1246 aaPredicted RBP17.89■□□□□ 0.45
SSB-204ENST00000417292 NF2P35240 595 aa17.88■□□□□ 0.45
SSB-204ENST00000417292 PRKG1Q13976 671 aa17.88■□□□□ 0.45
SSB-204ENST00000417292 SPRYD7Q5W111 196 aa17.88■□□□□ 0.45
SSB-204ENST00000417292 TRIM35Q9UPQ4 493 aa17.88■□□□□ 0.45
SSB-204ENST00000417292 SZT2Q5T011 3432 aa17.88■□□□□ 0.45
SSB-204ENST00000417292 SASH1O94885 1247 aa17.87■□□□□ 0.45
SSB-204ENST00000417292 ATP2B4P23634 1241 aa17.87■□□□□ 0.45
SSB-204ENST00000417292 LDLRAD1Q5T700 205 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms