RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 KCNQ5Q9NR82 932 aa28.02■■■□□ 2.08
ACTB-203ENST00000417101 PODXL2Q9NZ53 605 aa28.02■■■□□ 2.08
ACTB-203ENST00000417101 ANKIB1Q9P2G1 1089 aa28.02■■■□□ 2.08
ACTB-203ENST00000417101 IGKV5-2P06315 115 aa28.01■■■□□ 2.07
ACTB-203ENST00000417101 CTCFP49711 727 aaPredicted RBP28.01■■■□□ 2.07
ACTB-203ENST00000417101 DPF2Q92785 391 aa28.01■■■□□ 2.07
ACTB-203ENST00000417101 UFL1O94874 794 aa28■■■□□ 2.07
ACTB-203ENST00000417101 ZEB1P37275 1124 aaPredicted RBP28■■■□□ 2.07
ACTB-203ENST00000417101 CAPNS2Q96L46 248 aa28■■■□□ 2.07
ACTB-203ENST00000417101 ZC3H12CQ9C0D7 883 aaKnown RBP28■■■□□ 2.07
ACTB-203ENST00000417101 IL16Q14005 1332 aa27.99■■■□□ 2.07
ACTB-203ENST00000417101 CELF2O95319 508 aaKnown RBP27.99■■■□□ 2.07
ACTB-203ENST00000417101 GRM1Q13255 1194 aa27.99■■■□□ 2.07
ACTB-203ENST00000417101 G2E3Q7L622 706 aa27.99■■■□□ 2.07
ACTB-203ENST00000417101 GGA1Q9UJY5 639 aa27.99■■■□□ 2.07
ACTB-203ENST00000417101 TLL2Q9Y6L7 1015 aa27.99■■■□□ 2.07
ACTB-203ENST00000417101 RTL9Q8NET4 1388 aa27.99■■■□□ 2.07
ACTB-203ENST00000417101 TRPM7Q96QT4 1865 aa27.98■■■□□ 2.07
ACTB-203ENST00000417101 NEXNQ0ZGT2 675 aa27.98■■■□□ 2.07
ACTB-203ENST00000417101 CYP4F22Q6NT55 531 aa27.98■■■□□ 2.07
ACTB-203ENST00000417101 ANP32CO43423 234 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 SLC4A2P04920 1241 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 ECE1P42892 770 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 MAP2K1Q02750 393 aaPredicted RBP27.97■■■□□ 2.07
ACTB-203ENST00000417101 CDC37L1Q7L3B6 337 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 SAMD7Q7Z3H4 446 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 ANKRD18AQ8IVF6 992 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 PRDM10Q9NQV6 1147 aa27.97■■■□□ 2.07
ACTB-203ENST00000417101 G3V3G9 751 aa27.96■■■□□ 2.07
ACTB-203ENST00000417101 RPS12P25398 132 aaKnown RBP27.96■■■□□ 2.07
ACTB-203ENST00000417101 CTSWP56202 376 aa27.96■■■□□ 2.07
ACTB-203ENST00000417101 CWF19L2Q2TBE0 894 aaKnown RBP27.96■■■□□ 2.07
ACTB-203ENST00000417101 TBC1D10BQ4KMP7 808 aaPredicted RBP27.96■■■□□ 2.07
ACTB-203ENST00000417101 NCBP3Q53F19 620 aaKnown RBP27.96■■■□□ 2.07
ACTB-203ENST00000417101 DCAF8Q5TAQ9 597 aa27.96■■■□□ 2.07
ACTB-203ENST00000417101 ZNF408Q9H9D4 720 aa27.96■■■□□ 2.07
ACTB-203ENST00000417101 SALL2Q9Y467 1007 aaPredicted RBP27.95■■■□□ 2.06
ACTB-203ENST00000417101 NEURL1BA8MQ27 555 aa27.94■■■□□ 2.06
ACTB-203ENST00000417101 EGFRP00533 1210 aa27.94■■■□□ 2.06
ACTB-203ENST00000417101 LBX1P52954 281 aa27.94■■■□□ 2.06
ACTB-203ENST00000417101 SAPCD2Q86UD0 394 aa27.94■■■□□ 2.06
ACTB-203ENST00000417101 USP48Q86UV5 1035 aa27.94■■■□□ 2.06
ACTB-203ENST00000417101 XDHP47989 1333 aa27.93■■■□□ 2.06
ACTB-203ENST00000417101 ZNF316A6NFI3 1004 aaPredicted RBP27.93■■■□□ 2.06
ACTB-203ENST00000417101 RBM26Q5T8P6 1007 aaKnown RBP27.93■■■□□ 2.06
ACTB-203ENST00000417101 TTLL11Q8NHH1 800 aa27.93■■■□□ 2.06
ACTB-203ENST00000417101 CDC5LQ99459 802 aaKnown RBP27.93■■■□□ 2.06
ACTB-203ENST00000417101 FANCIQ9NVI1 1328 aa27.92■■■□□ 2.06
ACTB-203ENST00000417101 VIL1P09327 827 aaKnown RBP27.92■■■□□ 2.06
ACTB-203ENST00000417101 GREM2Q9H772 168 aa27.92■■■□□ 2.06
ACTB-203ENST00000417101 FLIIQ13045 1269 aa27.91■■■□□ 2.06
ACTB-203ENST00000417101 UBE3BQ7Z3V4 1068 aa27.91■■■□□ 2.06
ACTB-203ENST00000417101 HSPA8P11142 646 aaKnown RBP27.9■■■□□ 2.06
ACTB-203ENST00000417101 DLK2Q6UY11 383 aa27.9■■■□□ 2.06
ACTB-203ENST00000417101 H7C1W4 665 aa27.89■■■□□ 2.06
ACTB-203ENST00000417101 AOC2O75106 756 aa27.89■■■□□ 2.06
ACTB-203ENST00000417101 ATP2B4P23634 1241 aa27.89■■■□□ 2.06
ACTB-203ENST00000417101 KRT26Q7Z3Y9 468 aa27.89■■■□□ 2.06
ACTB-203ENST00000417101 WDR63Q8IWG1 891 aa27.89■■■□□ 2.06
ACTB-203ENST00000417101 SCN9AQ15858 1988 aa27.89■■■□□ 2.06
ACTB-203ENST00000417101 FKBP5Q13451 457 aaPredicted RBP27.88■■■□□ 2.05
ACTB-203ENST00000417101 BSDC1Q9NW68 430 aaPredicted RBP27.88■■■□□ 2.05
ACTB-203ENST00000417101 THSD7BQ9C0I4 1608 aa27.88■■■□□ 2.05
ACTB-203ENST00000417101 WTIPA6NIX2 430 aaPredicted RBP27.87■■■□□ 2.05
ACTB-203ENST00000417101 GCKRQ14397 625 aa27.87■■■□□ 2.05
ACTB-203ENST00000417101 KIF4BQ2VIQ3 1234 aa27.87■■■□□ 2.05
ACTB-203ENST00000417101 DCPSQ96C86 337 aaKnown RBP27.87■■■□□ 2.05
ACTB-203ENST00000417101 HHIPL1Q96JK4 782 aa27.87■■■□□ 2.05
ACTB-203ENST00000417101 BEGAINQ9BUH8 593 aa27.87■■■□□ 2.05
ACTB-203ENST00000417101 MINPP1Q9UNW1 487 aa27.87■■■□□ 2.05
ACTB-203ENST00000417101 MAP2K2P36507 400 aa27.86■■■□□ 2.05
ACTB-203ENST00000417101 EXOSC9Q06265 439 aaKnown RBP27.86■■■□□ 2.05
ACTB-203ENST00000417101 RSBN1LQ6PCB5 846 aaPredicted RBP27.86■■■□□ 2.05
ACTB-203ENST00000417101 DNAAF4Q8WXU2 420 aa27.86■■■□□ 2.05
ACTB-203ENST00000417101 VAMP4O75379 141 aa27.85■■■□□ 2.05
ACTB-203ENST00000417101 ADM5C9JUS6 153 aa27.84■■■□□ 2.05
ACTB-203ENST00000417101 AGBL3Q8NEM8 1001 aa27.84■■■□□ 2.05
ACTB-203ENST00000417101 MYH16Q9H6N6 1097 aa27.84■■■□□ 2.05
ACTB-203ENST00000417101 HUNKP57058 714 aa27.83■■■□□ 2.05
ACTB-203ENST00000417101 PODNQ7Z5L7 613 aa27.83■■■□□ 2.05
ACTB-203ENST00000417101 LINS1Q8NG48 757 aa27.83■■■□□ 2.05
ACTB-203ENST00000417101 PLA2G12BQ9BX93 195 aa27.83■■■□□ 2.05
ACTB-203ENST00000417101 GGA3Q9NZ52 723 aa27.83■■■□□ 2.05
ACTB-203ENST00000417101 MYH3P11055 1940 aa27.82■■■□□ 2.04
ACTB-203ENST00000417101 CCT4P50991 539 aaKnown RBP27.82■■■□□ 2.04
ACTB-203ENST00000417101 CASP7P55210 303 aa27.82■■■□□ 2.04
ACTB-203ENST00000417101 ZNF280AP59817 542 aaPredicted RBP27.82■■■□□ 2.04
ACTB-203ENST00000417101 ASTN2O75129 1339 aaPredicted RBP27.82■■■□□ 2.04
ACTB-203ENST00000417101 MED23Q9ULK4 1368 aa27.82■■■□□ 2.04
ACTB-203ENST00000417101 USP17L3A6NCW0 530 aa27.81■■■□□ 2.04
ACTB-203ENST00000417101 USP17L4A6NCW7 530 aa27.81■■■□□ 2.04
ACTB-203ENST00000417101 ITGA6P23229 1130 aa27.81■■■□□ 2.04
ACTB-203ENST00000417101 IGHMBP2P38935 993 aaKnown RBP27.81■■■□□ 2.04
ACTB-203ENST00000417101 USP17L1Q7RTZ2 530 aa27.81■■■□□ 2.04
ACTB-203ENST00000417101 GMLQ99445 158 aa27.81■■■□□ 2.04
ACTB-203ENST00000417101 SPINK5Q9NQ38 1064 aaPredicted RBP27.81■■■□□ 2.04
ACTB-203ENST00000417101 ZNF609O15014 1411 aa27.81■■■□□ 2.04
ACTB-203ENST00000417101 FAM161AQ3B820 660 aa27.8■■■□□ 2.04
ACTB-203ENST00000417101 SULF1Q8IWU6 871 aa27.8■■■□□ 2.04
ACTB-203ENST00000417101 FAM9BQ8IZU0 186 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms