RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 CAMSAP2Q08AD1 1489 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 PPP1R14CQ8TAE6 165 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
UBR4-205ENST00000417040 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 DBF4Q9UBU7 674 aaPredicted RBP13.73□□□□□ -0.21
UBR4-205ENST00000417040 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
UBR4-205ENST00000417040 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
UBR4-205ENST00000417040 ELF2Q15723 593 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 EVCP57679 992 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 CCDC129Q6ZRS4 1044 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 CTAGE1Q96RT6 745 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 RASSF4Q9H2L5 321 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 CUL5Q93034 780 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
UBR4-205ENST00000417040 EBAG9O00559 213 aa13.72□□□□□ -0.21
UBR4-205ENST00000417040 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
UBR4-205ENST00000417040 DHX29Q7Z478 1369 aaKnown RBP13.72□□□□□ -0.21
UBR4-205ENST00000417040 A0A1B0GVL5 298 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 C6orf163Q5TEZ5 329 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 TLDC2A0PJX2 215 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 WTAPQ15007 396 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
UBR4-205ENST00000417040 ZBTB43O43298 467 aa13.71□□□□□ -0.22
UBR4-205ENST00000417040 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.22
UBR4-205ENST00000417040 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.22
UBR4-205ENST00000417040 SPTLC2O15270 562 aa13.71□□□□□ -0.22
UBR4-205ENST00000417040 CAVIN2O95810 425 aa13.71□□□□□ -0.22
UBR4-205ENST00000417040 LONRF3Q496Y0 759 aa13.71□□□□□ -0.22
UBR4-205ENST00000417040 NSRP1Q9H0G5 558 aaKnown RBP13.71□□□□□ -0.22
UBR4-205ENST00000417040 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
UBR4-205ENST00000417040 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 ABCC5O15440 1437 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 GADD45BO75293 160 aaPredicted RBP13.7□□□□□ -0.22
UBR4-205ENST00000417040 TACC1O75410 805 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 SAMM50Q9Y512 469 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 CPLX4Q7Z7G2 160 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
UBR4-205ENST00000417040 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
UBR4-205ENST00000417040 LDHAL6AQ6ZMR3 332 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 KCNK9Q9NPC2 374 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
UBR4-205ENST00000417040 SELENOOQ9BVL4 669 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 IKBKGQ9Y6K9 419 aa13.7□□□□□ -0.22
UBR4-205ENST00000417040 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
UBR4-205ENST00000417040 KRT24Q2M2I5 525 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 ANKS4BQ8N8V4 417 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 FAM76AQ8TAV0 307 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 RPGRIP1LQ68CZ1 1315 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 FAM170AA1A519 330 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 HDXQ7Z353 690 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 MCMDC2Q4G0Z9 681 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 CREB3L3Q68CJ9 461 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 GSTA5Q7RTV2 222 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 PIK3R4Q99570 1358 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 ASIC1P78348 528 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 IFIT1BQ5T764 474 aaKnown RBP13.69□□□□□ -0.22
UBR4-205ENST00000417040 PLEKHM2Q8IWE5 1019 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
UBR4-205ENST00000417040 EPRSP07814 1512 aaKnown RBP13.68□□□□□ -0.22
UBR4-205ENST00000417040 KIF20AO95235 890 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 RTN1Q16799 776 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 GBP6Q6ZN66 633 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 SLC4A4Q9Y6R1 1079 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 IFI16Q16666 785 aaKnown RBP13.68□□□□□ -0.22
UBR4-205ENST00000417040 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 PPP4R3AQ6IN85 833 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 MCM7P33993 719 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 TBC1D5Q92609 795 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
UBR4-205ENST00000417040 FAM173BQ6P4H8 233 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 BAG1Q99933 345 aaPredicted RBP13.68□□□□□ -0.22
UBR4-205ENST00000417040 CARD6Q9BX69 1037 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 KIF5AQ12840 1032 aa13.68□□□□□ -0.22
UBR4-205ENST00000417040 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
UBR4-205ENST00000417040 PTPDC1A2A3K4 754 aa13.67□□□□□ -0.22
UBR4-205ENST00000417040 TTF1Q15361 905 aaPredicted RBP13.67□□□□□ -0.22
UBR4-205ENST00000417040 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
UBR4-205ENST00000417040 COMMD10Q9Y6G5 202 aa13.67□□□□□ -0.22
UBR4-205ENST00000417040 CETN1Q12798 172 aa13.67□□□□□ -0.22
UBR4-205ENST00000417040 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms