RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 UTP14AQ9BVJ6 771 aaKnown RBP11.74□□□□□ -0.53
RUNX1-206ENST00000416754 R3HDMLQ9H3Y0 253 aa11.74□□□□□ -0.53
RUNX1-206ENST00000416754 NUP98P52948 1817 aa11.74□□□□□ -0.53
RUNX1-206ENST00000416754 ANXA1P04083 346 aa11.73□□□□□ -0.53
RUNX1-206ENST00000416754 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
RUNX1-206ENST00000416754 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
RUNX1-206ENST00000416754 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
RUNX1-206ENST00000416754 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
RUNX1-206ENST00000416754 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
RUNX1-206ENST00000416754 HDAC9Q9UKV0 1011 aa11.73□□□□□ -0.53
RUNX1-206ENST00000416754 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
RUNX1-206ENST00000416754 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
RUNX1-206ENST00000416754 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
RUNX1-206ENST00000416754 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
RUNX1-206ENST00000416754 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
RUNX1-206ENST00000416754 GGA3Q9NZ52 723 aa11.72□□□□□ -0.53
RUNX1-206ENST00000416754 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 NUBP1P53384 320 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
RUNX1-206ENST00000416754 GRAPQ13588 217 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.53
RUNX1-206ENST00000416754 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
RUNX1-206ENST00000416754 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 GPR25O00155 361 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 GPSM2P81274 684 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 PDIA6Q15084 440 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
RUNX1-206ENST00000416754 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
RUNX1-206ENST00000416754 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
RUNX1-206ENST00000416754 DUOX1Q9NRD9 1551 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 TAF1P21675 1872 aa11.7□□□□□ -0.54
RUNX1-206ENST00000416754 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
RUNX1-206ENST00000416754 ECE2O60344 883 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 FXR1P51114 621 aaKnown RBP eCLIP11.69□□□□□ -0.54
RUNX1-206ENST00000416754 SCARF1Q14162 830 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
RUNX1-206ENST00000416754 FBXO46Q6PJ61 603 aaPredicted RBP11.69□□□□□ -0.54
RUNX1-206ENST00000416754 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 CELF1Q92879 486 aaKnown RBP11.69□□□□□ -0.54
RUNX1-206ENST00000416754 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 PCGF6Q9BYE7 350 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 CEP290O15078 2479 aa11.69□□□□□ -0.54
RUNX1-206ENST00000416754 KIAA0100Q14667 2235 aaKnown RBP11.68□□□□□ -0.54
RUNX1-206ENST00000416754 TRIOBPQ9H2D6 2365 aa11.68□□□□□ -0.54
RUNX1-206ENST00000416754 MAP3K13O43283 966 aa11.68□□□□□ -0.54
RUNX1-206ENST00000416754 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
RUNX1-206ENST00000416754 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
RUNX1-206ENST00000416754 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
RUNX1-206ENST00000416754 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
RUNX1-206ENST00000416754 MKI67P46013 3256 aaKnown RBP11.68□□□□□ -0.54
RUNX1-206ENST00000416754 VIL1P09327 827 aaKnown RBP11.67□□□□□ -0.54
RUNX1-206ENST00000416754 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
RUNX1-206ENST00000416754 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
RUNX1-206ENST00000416754 COL4A1P02462 1669 aa11.67□□□□□ -0.54
RUNX1-206ENST00000416754 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
RUNX1-206ENST00000416754 COPS6Q7L5N1 327 aa11.66□□□□□ -0.54
RUNX1-206ENST00000416754 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
RUNX1-206ENST00000416754 NUDCQ9Y266 331 aa11.66□□□□□ -0.54
RUNX1-206ENST00000416754 FKTNO75072 461 aa11.65□□□□□ -0.54
RUNX1-206ENST00000416754 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
RUNX1-206ENST00000416754 TM4SF4P48230 202 aa11.65□□□□□ -0.54
RUNX1-206ENST00000416754 TBC1D16Q8TBP0 767 aa11.65□□□□□ -0.54
RUNX1-206ENST00000416754 XAGE3Q8WTP9 111 aa11.65□□□□□ -0.54
RUNX1-206ENST00000416754 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
RUNX1-206ENST00000416754 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
RUNX1-206ENST00000416754 TCIRG1Q13488 830 aa11.64□□□□□ -0.55
RUNX1-206ENST00000416754 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
RUNX1-206ENST00000416754 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
RUNX1-206ENST00000416754 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
RUNX1-206ENST00000416754 COLQQ9Y215 455 aaPredicted RBP11.64□□□□□ -0.55
RUNX1-206ENST00000416754 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
RUNX1-206ENST00000416754 LAMB2P55268 1798 aa11.64□□□□□ -0.55
RUNX1-206ENST00000416754 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 WTIPA6NIX2 430 aaPredicted RBP11.63□□□□□ -0.55
RUNX1-206ENST00000416754 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 ATN1P54259 1190 aaPredicted RBP11.63□□□□□ -0.55
RUNX1-206ENST00000416754 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
RUNX1-206ENST00000416754 PRKG1Q13976 671 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 TTLL12Q14166 644 aaPredicted RBP11.63□□□□□ -0.55
RUNX1-206ENST00000416754 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 GMLQ99445 158 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 MXD3Q9BW11 206 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 FZD1Q9UP38 647 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 HTTP42858 3142 aa11.63□□□□□ -0.55
RUNX1-206ENST00000416754 FKBP1BP68106 108 aa11.62□□□□□ -0.55
RUNX1-206ENST00000416754 CAP1Q01518 475 aa11.62□□□□□ -0.55
RUNX1-206ENST00000416754 NBPF9Q3BBW0 867 aa11.62□□□□□ -0.55
RUNX1-206ENST00000416754 RSBN1LQ6PCB5 846 aaPredicted RBP11.62□□□□□ -0.55
RUNX1-206ENST00000416754 TMC4Q7Z404 712 aa11.62□□□□□ -0.55
RUNX1-206ENST00000416754 OTUD5Q96G74 571 aa11.62□□□□□ -0.55
RUNX1-206ENST00000416754 ZC3H12CQ9C0D7 883 aaKnown RBP11.62□□□□□ -0.55
RUNX1-206ENST00000416754 MYOZ2Q9NPC6 264 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms