RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 CNNM1Q9NRU3 951 aa16.19■□□□□ 0.18
PTPN6-203ENST00000416215 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN6-203ENST00000416215 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
PTPN6-203ENST00000416215 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
PTPN6-203ENST00000416215 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
PTPN6-203ENST00000416215 INTS4Q96HW7 963 aaKnown RBP16.19■□□□□ 0.18
PTPN6-203ENST00000416215 SCARF1Q14162 830 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 CCDC158Q5M9N0 1113 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 FOXD4L5Q5VV16 416 aaPredicted RBP16.18■□□□□ 0.18
PTPN6-203ENST00000416215 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 FOXD4L4Q8WXT5 416 aaPredicted RBP16.18■□□□□ 0.18
PTPN6-203ENST00000416215 TM6SF1Q9BZW5 370 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 PDRG1Q9NUG6 133 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
PTPN6-203ENST00000416215 LIMCH1Q9UPQ0 1083 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN6-203ENST00000416215 CYP46A1Q9Y6A2 500 aa16.18■□□□□ 0.18
PTPN6-203ENST00000416215 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
PTPN6-203ENST00000416215 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
PTPN6-203ENST00000416215 RFX7Q2KHR2 1363 aa16.17■□□□□ 0.18
PTPN6-203ENST00000416215 VPS53Q5VIR6 699 aa16.17■□□□□ 0.18
PTPN6-203ENST00000416215 LARGE1O95461 756 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 RNF20Q5VTR2 975 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 USPL1Q5W0Q7 1092 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 CHAMP1Q96JM3 812 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 PI16Q6UXB8 463 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 HELBQ8NG08 1087 aaPredicted RBP16.16■□□□□ 0.18
PTPN6-203ENST00000416215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
PTPN6-203ENST00000416215 TCEANC2Q96MN5 208 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 RREB1Q92766 1687 aa16.16■□□□□ 0.18
PTPN6-203ENST00000416215 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 DTNBO60941 627 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 MCTP1Q6DN14 999 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 RPAP1Q9BWH6 1393 aaPredicted RBP16.15■□□□□ 0.18
PTPN6-203ENST00000416215 PDE8BO95263 885 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 ZAP70P43403 619 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 ZMYM1Q5SVZ6 1142 aa16.15■□□□□ 0.18
PTPN6-203ENST00000416215 RNF113AO15541 343 aaKnown RBP16.14■□□□□ 0.17
PTPN6-203ENST00000416215 NTSR2O95665 410 aa16.14■□□□□ 0.17
PTPN6-203ENST00000416215 HELLSQ9NRZ9 838 aa16.14■□□□□ 0.17
PTPN6-203ENST00000416215 PSMA5P28066 241 aa16.14■□□□□ 0.17
PTPN6-203ENST00000416215 AK7Q96M32 723 aa16.14■□□□□ 0.17
PTPN6-203ENST00000416215 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
PTPN6-203ENST00000416215 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 MEX3CQ5U5Q3 659 aaKnown RBP16.13■□□□□ 0.17
PTPN6-203ENST00000416215 BLOC1S2Q6QNY1 142 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
PTPN6-203ENST00000416215 GOLGA6L22H0YM25 854 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 SNAP23O00161 211 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 BRD1O95696 1058 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 CYP21A2P08686 494 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 CERKQ8TCT0 537 aa16.13■□□□□ 0.17
PTPN6-203ENST00000416215 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
PTPN6-203ENST00000416215 HSPA1LP34931 641 aa16.12■□□□□ 0.17
PTPN6-203ENST00000416215 MCAMP43121 646 aa16.12■□□□□ 0.17
PTPN6-203ENST00000416215 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
PTPN6-203ENST00000416215 OSBP2Q969R2 916 aa16.12■□□□□ 0.17
PTPN6-203ENST00000416215 MAST3O60307 1309 aa16.12■□□□□ 0.17
PTPN6-203ENST00000416215 M0R2C6 588 aa16.11■□□□□ 0.17
PTPN6-203ENST00000416215 RPS6KB1P23443 525 aa16.11■□□□□ 0.17
PTPN6-203ENST00000416215 ME3Q16798 604 aa16.11■□□□□ 0.17
PTPN6-203ENST00000416215 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
PTPN6-203ENST00000416215 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
PTPN6-203ENST00000416215 BICDL1Q6ZP65 573 aa16.11■□□□□ 0.17
PTPN6-203ENST00000416215 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
PTPN6-203ENST00000416215 A0A0G2JLW4 131 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
PTPN6-203ENST00000416215 PHKA1P46020 1223 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 CLEC4GQ6UXB4 293 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 TICAM2Q86XR7 235 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
PTPN6-203ENST00000416215 DDX60Q8IY21 1712 aaKnown RBP16.1■□□□□ 0.17
PTPN6-203ENST00000416215 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
PTPN6-203ENST00000416215 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 ZSCAN31Q96LW9 406 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-203ENST00000416215 NEK1Q96PY6 1258 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 MROH5Q6ZUA9 1318 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 CNTNAP4Q9C0A0 1308 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 PTMSP20962 102 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 FGFR2P21802 821 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 AFF2P51816 1311 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-203ENST00000416215 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
PTPN6-203ENST00000416215 SKOR2Q2VWA4 1001 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-203ENST00000416215 DSCC1Q9BVC3 393 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 LMBRD1Q9NUN5 540 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 245.4 ms