RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SP8Q8IXZ3 490 aa17.93■□□□□ 0.46
SGCE-202ENST00000415788 ZNF594Q96JF6 807 aaPredicted RBP17.93■□□□□ 0.46
SGCE-202ENST00000415788 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
SGCE-202ENST00000415788 EYA2O00167 538 aa17.92■□□□□ 0.46
SGCE-202ENST00000415788 KLHDC4Q8TBB5 520 aa17.92■□□□□ 0.46
SGCE-202ENST00000415788 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
SGCE-202ENST00000415788 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
SGCE-202ENST00000415788 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
SGCE-202ENST00000415788 IL15P40933 162 aaPredicted RBP17.91■□□□□ 0.46
SGCE-202ENST00000415788 RWDD1Q9H446 243 aaPredicted RBP17.91■□□□□ 0.46
SGCE-202ENST00000415788 PA2G4Q9UQ80 394 aaKnown RBP17.91■□□□□ 0.46
SGCE-202ENST00000415788 SURF6O75683 361 aaKnown RBP17.9■□□□□ 0.46
SGCE-202ENST00000415788 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
SGCE-202ENST00000415788 MINPP1Q9UNW1 487 aa17.9■□□□□ 0.46
SGCE-202ENST00000415788 RIPOR2Q9Y4F9 1068 aa17.9■□□□□ 0.46
SGCE-202ENST00000415788 MROH5Q6ZUA9 1318 aa17.9■□□□□ 0.46
SGCE-202ENST00000415788 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
SGCE-202ENST00000415788 ANKRD2Q9GZV1 360 aa17.9■□□□□ 0.46
SGCE-202ENST00000415788 SIL1Q9H173 461 aa17.9■□□□□ 0.46
SGCE-202ENST00000415788 COL4A1P02462 1669 aa17.89■□□□□ 0.46
SGCE-202ENST00000415788 CCDC93Q567U6 631 aa17.89■□□□□ 0.45
SGCE-202ENST00000415788 ERC1Q8IUD2 1116 aa17.89■□□□□ 0.45
SGCE-202ENST00000415788 PUS3Q9BZE2 481 aaKnown RBP17.89■□□□□ 0.45
SGCE-202ENST00000415788 C21orf2O43822 256 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 LRRC24Q50LG9 513 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 ATG9AQ7Z3C6 839 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 RTKN2Q8IZC4 609 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 RAB11FIP3O75154 756 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 CHRNDQ07001 517 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 OS9Q13438 667 aaPredicted RBP17.88■□□□□ 0.45
SGCE-202ENST00000415788 IL27Q8NEV9 243 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 DCTPP1Q9H773 170 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 PODXL2Q9NZ53 605 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 WWC3Q9ULE0 1092 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 SLX4Q8IY92 1834 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 XDHP47989 1333 aa17.88■□□□□ 0.45
SGCE-202ENST00000415788 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
SGCE-202ENST00000415788 METTL24Q5JXM2 366 aa17.87■□□□□ 0.45
SGCE-202ENST00000415788 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
SGCE-202ENST00000415788 ANKIB1Q9P2G1 1089 aa17.87■□□□□ 0.45
SGCE-202ENST00000415788 CEP126Q9P2H0 1117 aa17.87■□□□□ 0.45
SGCE-202ENST00000415788 LRRC37AA6NMS7 1700 aa17.87■□□□□ 0.45
SGCE-202ENST00000415788 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
SGCE-202ENST00000415788 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
SGCE-202ENST00000415788 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
SGCE-202ENST00000415788 TAF1P21675 1872 aa17.86■□□□□ 0.45
SGCE-202ENST00000415788 MPNDQ8N594 471 aa17.86■□□□□ 0.45
SGCE-202ENST00000415788 PDE8BO95263 885 aa17.85■□□□□ 0.45
SGCE-202ENST00000415788 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
SGCE-202ENST00000415788 CENPQQ7L2Z9 268 aaPredicted RBP17.85■□□□□ 0.45
SGCE-202ENST00000415788 VGLL2Q8N8G2 317 aa17.85■□□□□ 0.45
SGCE-202ENST00000415788 LEMD3Q9Y2U8 911 aa17.85■□□□□ 0.45
SGCE-202ENST00000415788 SNED1Q8TER0 1413 aa17.85■□□□□ 0.45
SGCE-202ENST00000415788 ATP2B4P23634 1241 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 GPSM2P81274 684 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 GSE1Q14687 1217 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 OLFM4Q6UX06 510 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 SUPT20HQ8NEM7 779 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 KIF1BPQ96EK5 621 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 GGA1Q9UJY5 639 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 KDM2BQ8NHM5 1336 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 GPR162Q16538 588 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 PSMD1Q99460 953 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 RTFDC1Q9BY42 306 aaPredicted RBP17.84■□□□□ 0.45
SGCE-202ENST00000415788 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
SGCE-202ENST00000415788 GRIN3BO60391 1043 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 SASH1O94885 1247 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 IGHDP01880 384 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 YBX3P16989 372 aaKnown RBP eCLIP17.83■□□□□ 0.44
SGCE-202ENST00000415788 KCNJ4P48050 445 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
SGCE-202ENST00000415788 RHPN1Q8TCX5 695 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 GPR108Q9NPR9 543 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 CACNA1SQ13698 1873 aa17.83■□□□□ 0.44
SGCE-202ENST00000415788 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
SGCE-202ENST00000415788 TFCP2Q12800 502 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 UBE4AQ14139 1066 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 HELBQ8NG08 1087 aaPredicted RBP17.82■□□□□ 0.44
SGCE-202ENST00000415788 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
SGCE-202ENST00000415788 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 TAF5LO75529 589 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 UFL1O94874 794 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 TBC1D16Q8TBP0 767 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 EYA3Q99504 573 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 LRRCC1Q9C099 1032 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 TAOK3Q9H2K8 898 aa17.82■□□□□ 0.44
SGCE-202ENST00000415788 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
SGCE-202ENST00000415788 SLC51AQ86UW1 340 aa17.81■□□□□ 0.44
SGCE-202ENST00000415788 LPIN2Q92539 896 aa17.81■□□□□ 0.44
SGCE-202ENST00000415788 VPS33BQ9H267 617 aa17.81■□□□□ 0.44
SGCE-202ENST00000415788 C6orf229H3BNL8 230 aa17.8■□□□□ 0.44
SGCE-202ENST00000415788 NFKBIBQ15653 356 aa17.8■□□□□ 0.44
SGCE-202ENST00000415788 POLLQ9UGP5 575 aa17.8■□□□□ 0.44
SGCE-202ENST00000415788 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
SGCE-202ENST00000415788 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
SGCE-202ENST00000415788 SLC5A1P13866 664 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms