RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 RRP15Q9Y3B9 282 aaKnown RBP15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 TUBBP07437 444 aa15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 RHOXF2BP0C7M4 288 aa15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 MYL5Q02045 173 aa15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 KLHL10Q6JEL2 608 aa15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 RHOXF2Q9BQY4 288 aa15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
CLTCL1-201ENST00000412649 CTAGE9A4FU28 777 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 EBAG9O00559 213 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 FANCAO15360 1455 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 ABCC1P33527 1531 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 ARHGAP6O43182 974 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 HSP90AB2PQ58FF8 381 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 LZTFL1Q9NQ48 299 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 JAK2O60674 1132 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 LARGE1O95461 756 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 PTH1RQ03431 593 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 CCDC181Q5TID7 509 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 KIAA1328Q86T90 577 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 CCDC144CPQ8IYA2 1237 aa15.98■□□□□ 0.15
CLTCL1-201ENST00000412649 PIP4K2BP78356 416 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 CCDC47Q96A33 483 aaKnown RBP15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 MYCBPQ99417 103 aaPredicted RBP15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 MED14O60244 1454 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 ST7Q9NRC1 585 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 ERICH2A1L162 156 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 GOLGA8BA8MQT2 603 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 CYP2C19P33261 490 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 IMMTQ16891 758 aaKnown RBP15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 MICALCLQ6ZW33 695 aa15.97■□□□□ 0.15
CLTCL1-201ENST00000412649 USP27XA6NNY8 438 aa15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 MYO1CO00159 1063 aa15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 WDHD1O75717 1129 aaPredicted RBP15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 BRD3Q15059 726 aa15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 ADCK5Q3MIX3 580 aa15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 DNAJC21Q5F1R6 531 aaKnown RBP15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 GOLGA6L10A6NI86 522 aa15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 SARM1Q6SZW1 724 aa15.96■□□□□ 0.15
CLTCL1-201ENST00000412649 BTBD11A6QL63 1104 aa15.96■□□□□ 0.14
CLTCL1-201ENST00000412649 FAM227BQ96M60 508 aa15.96■□□□□ 0.14
CLTCL1-201ENST00000412649 XBP1P17861 261 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 CT47A1Q5JQC4 288 aaPredicted RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 ZNF569Q5MCW4 686 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 MAGEC2Q9UBF1 373 aaPredicted RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 IBSPP21815 317 aaPredicted RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 ACTN2P35609 894 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 MYO5CQ9NQX4 1742 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 FOXO3O43524 673 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 RNF187Q5TA31 235 aaPredicted RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 EXOC4Q96A65 974 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 RPAP1Q9BWH6 1393 aaPredicted RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 MARCKSP29966 332 aaPredicted RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 LLPHQ9BRT6 129 aaKnown RBP15.95■□□□□ 0.14
CLTCL1-201ENST00000412649 NLRP12P59046 1061 aa15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 SSH3Q8TE77 659 aa15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 AFAP1L1Q8TED9 768 aa15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 NUP88Q99567 741 aaPredicted RBP15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 APOBRQ0VD83 1088 aa15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
CLTCL1-201ENST00000412649 NPATQ14207 1427 aa15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 CTCFLQ8NI51 663 aaPredicted RBP15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 RABGGTAQ92696 567 aa15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 KIAA1468Q9P260 1216 aa15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
CLTCL1-201ENST00000412649 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 ANXA1P04083 346 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 DHX32Q7L7V1 743 aaKnown RBP15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 BRMS1Q9HCU9 246 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 ABCA8O94911 1581 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 TTC14Q96N46 770 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 YEATS4O95619 227 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 MCMDC2Q4G0Z9 681 aa15.92■□□□□ 0.14
CLTCL1-201ENST00000412649 CSB-PGBD3P0DP91 1061 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 TUBB2AQ13885 445 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 SART3Q15020 963 aaKnown RBP15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 TUBB2BQ9BVA1 445 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 USP28Q96RU2 1077 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 USP44Q9H0E7 712 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 PPP2R2CQ9Y2T4 447 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 JRKLQ9Y4A0 524 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 ICE2Q659A1 982 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 BRAPQ7Z569 592 aa15.91■□□□□ 0.14
CLTCL1-201ENST00000412649 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms