RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 SPRYD3Q8NCJ5 442 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 FAM212AQ96EL1 285 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 BOLA2Q9H3K6 86 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 CEP126Q9P2H0 1117 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 TRMT112Q9UI30 125 aaKnown RBP7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 USP21Q9UK80 565 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 TBC1D2BQ9UPU7 963 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 UBR2Q8IWV8 1755 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 NEK4P51957 841 aa7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 CWC22Q9HCG8 908 aaKnown RBP7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 DBNLQ9UJU6 430 aaKnown RBP7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.58□□□□□ -1.2
GTF3C3-202ENST00000409364 PAPPAQ13219 1627 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 SHANK3Q9BYB0 1731 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 BCL9LQ86UU0 1499 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 IRS4O14654 1257 aaPredicted RBP7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 PDE8AO60658 829 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 CD2BP2O95400 341 aaKnown RBP7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 GPTP24298 496 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 DDIT3P35638 169 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 TTLL11Q8NHH1 800 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 NEUROD6Q96NK8 337 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 LSG1Q9H089 658 aaKnown RBP7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 RAD50Q92878 1312 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 LAMB4A4D0S4 1761 aa7.57□□□□□ -1.2
GTF3C3-202ENST00000409364 PLCH1Q4KWH8 1693 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 ANKRD18BA2A2Z9 1011 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 RGL2O15211 777 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 KCNQ2O43526 872 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 FRAT2O75474 233 aaPredicted RBP7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 TIMM10P62072 90 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 ITPK1Q13572 414 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 CLEC4GQ6UXB4 293 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 HAUS7Q99871 368 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 FSD1Q9BTV5 496 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 PALLDQ8WX93 1383 aa7.56□□□□□ -1.2
GTF3C3-202ENST00000409364 ZKSCAN1P17029 563 aaPredicted RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 CTSWP56202 376 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 LRRC24Q50LG9 513 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 CCDC158Q5M9N0 1113 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 RC3H1Q5TC82 1133 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 MEX3CQ5U5Q3 659 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 LDHAL6AQ6ZMR3 332 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 UTP14AQ9BVJ6 771 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 ZNF652Q9Y2D9 606 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 A0A1B0GUL7 405 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 ONECUT3O60422 494 aaPredicted RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 CAMTA2O94983 1202 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 ITGA6P23229 1130 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 NUCB2P80303 420 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 LRRFIP1Q32MZ4 808 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 GORABQ5T7V8 394 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 FBXO41Q8TF61 875 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 MAP4K1Q92918 833 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 KCNB2Q92953 911 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 GJD4Q96KN9 370 aaPredicted RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 PUS3Q9BZE2 481 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 IL25Q9H293 177 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 PALD1Q9ULE6 856 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 BOLA1Q9Y3E2 137 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 RIPOR2Q9Y4F9 1068 aa7.55□□□□□ -1.2
GTF3C3-202ENST00000409364 KCNJ4P48050 445 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 NECTIN1Q15223 517 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 RFX7Q2KHR2 1363 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 TPRNQ4KMQ1 711 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 SUSD4Q5VX71 490 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 KBTBD3Q8NAB2 608 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 SH3TC1Q8TE82 1336 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 TM6SF1Q9BZW5 370 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 NWD2Q9ULI1 1742 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 SNX14Q9Y5W7 946 aa7.54□□□□□ -1.2
GTF3C3-202ENST00000409364 ARFGEF2Q9Y6D5 1785 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 CCDC171Q6TFL3 1326 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 IFIT1P09914 478 aaKnown RBP7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 PSMA5P28066 241 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 MCM4P33991 863 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 PTH1RQ03431 593 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 RAB3GAP1Q15042 981 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 MCMDC2Q4G0Z9 681 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 METTL24Q5JXM2 366 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 INTS4Q96HW7 963 aaKnown RBP7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 TMX3Q96JJ7 454 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 GREM2Q9H772 168 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms