RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CCDC73Q6ZRK6 1079 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 KBTBD3Q8NAB2 608 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 BECN2A8MW95 431 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.169e-7■□□□□ 10.7
PCNX4-204ENST00000406949 TRDNQ13061 729 aa14.02□□□□□ -0.16
PCNX4-204ENST00000406949 TTC6Q86TZ1 520 aa14.02□□□□□ -0.16
PCNX4-204ENST00000406949 NOL7Q9UMY1 257 aaKnown RBP14.02□□□□□ -0.16
PCNX4-204ENST00000406949 FAM208AQ9UK61 1670 aaKnown RBP14.02□□□□□ -0.16
PCNX4-204ENST00000406949 XRN1Q8IZH2 1706 aaKnown RBP14.02□□□□□ -0.16
PCNX4-204ENST00000406949 EYA2O00167 538 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 NFAT5O94916 1531 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 CYP21A2P08686 494 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 NBPF14Q5TI25 921 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
PCNX4-204ENST00000406949 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
PCNX4-204ENST00000406949 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
PCNX4-204ENST00000406949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
PCNX4-204ENST00000406949 UQCRHLA0A096LP55 91 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 STARD3NLO95772 234 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 UQCRHP07919 91 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 LIG1P18858 919 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
PCNX4-204ENST00000406949 TTLL5Q6EMB2 1281 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 HAUS7Q99871 368 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
PCNX4-204ENST00000406949 NFXL1Q6ZNB6 911 aa14.01□□□□□ -0.17
PCNX4-204ENST00000406949 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
PCNX4-204ENST00000406949 MEGF6O75095 1541 aa14□□□□□ -0.17
PCNX4-204ENST00000406949 TPM2P07951 284 aa14□□□□□ -0.17
PCNX4-204ENST00000406949 SDF4Q9BRK5 362 aa14□□□□□ -0.17
PCNX4-204ENST00000406949 KINO60870 393 aaKnown RBP14□□□□□ -0.17
PCNX4-204ENST00000406949 IMMTQ16891 758 aaKnown RBP14□□□□□ -0.17
PCNX4-204ENST00000406949 CFAP45Q9UL16 551 aa14□□□□□ -0.17
PCNX4-204ENST00000406949 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
PCNX4-204ENST00000406949 LUZP1Q86V48 1076 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 HELBQ8NG08 1087 aaPredicted RBP13.99□□□□□ -0.17
PCNX4-204ENST00000406949 OFD1O75665 1012 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 DHX32Q7L7V1 743 aaKnown RBP13.99□□□□□ -0.17
PCNX4-204ENST00000406949 CCDC191Q8NCU4 936 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 AKAP2Q9Y2D5 859 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 PTPDC1A2A3K4 754 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 HMGB1P09429 215 aaKnown RBP13.99□□□□□ -0.17
PCNX4-204ENST00000406949 ANO6Q4KMQ2 910 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 TBC1D2BQ9UPU7 963 aa13.99□□□□□ -0.17
PCNX4-204ENST00000406949 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 RNF113AO15541 343 aaKnown RBP13.98□□□□□ -0.17
PCNX4-204ENST00000406949 POLR3DP05423 398 aaPredicted RBP13.98□□□□□ -0.17
PCNX4-204ENST00000406949 ADORA1P30542 326 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 HS1BP3Q53T59 392 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 RRP12Q5JTH9 1297 aaKnown RBP13.98□□□□□ -0.17
PCNX4-204ENST00000406949 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 ASAP1Q9ULH1 1129 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 GOLGA8BA8MQT2 603 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 TYRO3Q06418 890 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 STK38Q15208 465 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 PI16Q6UXB8 463 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 UTYO14607 1347 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 OTUD7BQ6GQQ9 843 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
PCNX4-204ENST00000406949 HEG1Q9ULI3 1381 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
PCNX4-204ENST00000406949 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 ATP2B3Q16720 1220 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 UVSSAQ2YD98 709 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 CCDC144CPQ8IYA2 1237 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 XAGE2Q96GT9 111 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 SLAIN2Q9P270 581 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 CTNNA3Q9UI47 895 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
PCNX4-204ENST00000406949 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCNX4-204ENST00000406949 DNAJC25Q9H1X3 360 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
PCNX4-204ENST00000406949 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
PCNX4-204ENST00000406949 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 ZNF213O14771 459 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 NPHP1O15259 732 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 ST3GAL1Q11201 340 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 SCRN1Q12765 414 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 PDLIM2Q96JY6 352 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 FTOQ9C0B1 505 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCNX4-204ENST00000406949 E7EWF7 191 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 HSPD1P10809 573 aaKnown RBP13.96□□□□□ -0.17
PCNX4-204ENST00000406949 ZAP70P43403 619 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 ZNF165P49910 485 aa13.96□□□□□ -0.17
PCNX4-204ENST00000406949 HMGN5P82970 282 aaKnown RBP13.96□□□□□ -0.17
PCNX4-204ENST00000406949 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
PCNX4-204ENST00000406949 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
PCNX4-204ENST00000406949 ERVV-2B6SEH9 535 aa13.95□□□□□ -0.18
PCNX4-204ENST00000406949 RXRAP19793 462 aa13.95□□□□□ -0.18
PCNX4-204ENST00000406949 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
PCNX4-204ENST00000406949 ANKRD18BA2A2Z9 1011 aa13.95□□□□□ -0.18
PCNX4-204ENST00000406949 H7C1W4 665 aa13.95□□□□□ -0.18
PCNX4-204ENST00000406949 GTF2E1P29083 439 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms