RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
LIMK2-204ENST00000406516 NUP188Q5SRE5 1749 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 OFD1O75665 1012 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 SASH1O94885 1247 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-204ENST00000406516 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 G3BP1Q13283 466 aaKnown RBP eCLIP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 EAF2Q96CJ1 260 aaPredicted RBP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 FAM227BQ96M60 508 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 FIBPO43427 364 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 F13A1P00488 732 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 KCNJ4P48050 445 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 TMEM87AQ8NBN3 555 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
LIMK2-204ENST00000406516 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
LIMK2-204ENST00000406516 GJB2P29033 226 aa18.18■□□□□ 0.5
LIMK2-204ENST00000406516 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
LIMK2-204ENST00000406516 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
LIMK2-204ENST00000406516 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
LIMK2-204ENST00000406516 ZKSCAN5Q9Y2L8 839 aa18.18■□□□□ 0.5
LIMK2-204ENST00000406516 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
LIMK2-204ENST00000406516 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
LIMK2-204ENST00000406516 PRKCSHP14314 528 aaPredicted RBP18.17■□□□□ 0.5
LIMK2-204ENST00000406516 NMIQ13287 307 aaPredicted RBP18.17■□□□□ 0.5
LIMK2-204ENST00000406516 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
LIMK2-204ENST00000406516 KLHDC4Q8TBB5 520 aa18.17■□□□□ 0.5
LIMK2-204ENST00000406516 ZSWIM6Q9HCJ5 1215 aa18.17■□□□□ 0.5
LIMK2-204ENST00000406516 CCDC39Q9UFE4 941 aa18.17■□□□□ 0.5
LIMK2-204ENST00000406516 RBM8AQ9Y5S9 174 aaKnown RBP18.17■□□□□ 0.5
LIMK2-204ENST00000406516 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
LIMK2-204ENST00000406516 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
LIMK2-204ENST00000406516 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
LIMK2-204ENST00000406516 TBC1D2BQ9UPU7 963 aa18.17■□□□□ 0.5
LIMK2-204ENST00000406516 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 CCDC183Q5T5S1 534 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 COL23A1Q86Y22 540 aaPredicted RBP18.16■□□□□ 0.5
LIMK2-204ENST00000406516 LAMB4A4D0S4 1761 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 PNPLA7Q6ZV29 1317 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 ZNF500O60304 480 aaPredicted RBP18.16■□□□□ 0.5
LIMK2-204ENST00000406516 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 TPM2P07951 284 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 TRAPPC3LQ5T215 181 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 COPS6Q7L5N1 327 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 BOLA2Q9H3K6 86 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
LIMK2-204ENST00000406516 PTMAP06454 111 aaKnown RBP18.16■□□□□ 0.5
LIMK2-204ENST00000406516 XAGE3Q8WTP9 111 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 TM6SF1Q9BZW5 370 aa18.16■□□□□ 0.5
LIMK2-204ENST00000406516 UBE2HP62256 183 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 ME3Q16798 604 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 UTYO14607 1347 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 VPS37CA5D8V6 355 aaPredicted RBP18.15■□□□□ 0.5
LIMK2-204ENST00000406516 ST3GAL1Q11201 340 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 KCNB2Q92953 911 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
LIMK2-204ENST00000406516 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 SH2B1Q9NRF2 756 aaPredicted RBP18.15■□□□□ 0.5
LIMK2-204ENST00000406516 MTMR6Q9Y217 621 aa18.15■□□□□ 0.5
LIMK2-204ENST00000406516 COL15A1P39059 1388 aa18.14■□□□□ 0.49
LIMK2-204ENST00000406516 A0A0D9SFI3 127 aa18.14■□□□□ 0.49
LIMK2-204ENST00000406516 DNM1Q05193 864 aaKnown RBP18.14■□□□□ 0.49
LIMK2-204ENST00000406516 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
LIMK2-204ENST00000406516 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
LIMK2-204ENST00000406516 HSP90AA2PQ14568 343 aaPredicted RBP18.14■□□□□ 0.49
LIMK2-204ENST00000406516 DZIP3Q86Y13 1208 aaKnown RBP18.13■□□□□ 0.49
LIMK2-204ENST00000406516 MAP4K1Q92918 833 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 R3HCC1Q9Y3T6 440 aaKnown RBP18.13■□□□□ 0.49
LIMK2-204ENST00000406516 HIP1O00291 1037 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 RFC4P35249 363 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 MYD88Q99836 296 aa18.13■□□□□ 0.49
LIMK2-204ENST00000406516 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
LIMK2-204ENST00000406516 SLC27A2O14975 620 aa18.12■□□□□ 0.49
LIMK2-204ENST00000406516 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
LIMK2-204ENST00000406516 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
LIMK2-204ENST00000406516 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
LIMK2-204ENST00000406516 MPNDQ8N594 471 aa18.12■□□□□ 0.49
LIMK2-204ENST00000406516 UBR3Q6ZT12 1888 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 ADRA2BP18089 450 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 MCM5P33992 734 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 FAM184AQ8NB25 1140 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 USP25Q9UHP3 1055 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 GCKRQ14397 625 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 USPL1Q5W0Q7 1092 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 TAF6LQ9Y6J9 622 aa18.11■□□□□ 0.49
LIMK2-204ENST00000406516 HLFQ16534 295 aa18.1■□□□□ 0.49
LIMK2-204ENST00000406516 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
LIMK2-204ENST00000406516 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
LIMK2-204ENST00000406516 CAMTA2O94983 1202 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms