RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 GBP4Q96PP9 640 aa19.47■□□□□ 0.71
PARVB-204ENST00000406477 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
PARVB-204ENST00000406477 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
PARVB-204ENST00000406477 PTMSP20962 102 aa19.46■□□□□ 0.71
PARVB-204ENST00000406477 PSMA5P28066 241 aa19.46■□□□□ 0.71
PARVB-204ENST00000406477 PRPF40BQ6NWY9 871 aaKnown RBP19.46■□□□□ 0.71
PARVB-204ENST00000406477 INTS4Q96HW7 963 aaKnown RBP19.46■□□□□ 0.71
PARVB-204ENST00000406477 BTAF1O14981 1849 aa19.46■□□□□ 0.71
PARVB-204ENST00000406477 RIC1Q4ADV7 1423 aa19.46■□□□□ 0.7
PARVB-204ENST00000406477 GOLIM4O00461 696 aa19.45■□□□□ 0.7
PARVB-204ENST00000406477 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
PARVB-204ENST00000406477 CUL4AQ13619 759 aa19.45■□□□□ 0.7
PARVB-204ENST00000406477 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
PARVB-204ENST00000406477 EDC3Q96F86 508 aaKnown RBP19.45■□□□□ 0.7
PARVB-204ENST00000406477 TMX3Q96JJ7 454 aa19.45■□□□□ 0.7
PARVB-204ENST00000406477 CCNL1Q9UK58 526 aaPredicted RBP19.45■□□□□ 0.7
PARVB-204ENST00000406477 PDE8BO95263 885 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
PARVB-204ENST00000406477 SSFA2P28290 1259 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 MCM4P33991 863 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 CREB3L3Q68CJ9 461 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 SEPT12Q8IYM1 358 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 MPHOSPH8Q99549 860 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 FOXD4L1Q9NU39 408 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 NARFQ9UHQ1 456 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
PARVB-204ENST00000406477 DDX11L8A8MPP1 907 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 TAF5LO75529 589 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
PARVB-204ENST00000406477 IGHMBP2P38935 993 aaKnown RBP19.44■□□□□ 0.7
PARVB-204ENST00000406477 KRT32Q14532 448 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 UPF3BQ9BZI7 483 aaKnown RBP19.44■□□□□ 0.7
PARVB-204ENST00000406477 NYXQ9GZU5 481 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 LRP5O75197 1615 aa19.44■□□□□ 0.7
PARVB-204ENST00000406477 LAMB2P55268 1798 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 UQCRFS1P1P0C7P4 283 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 PUM3Q15397 648 aaKnown RBP19.43■□□□□ 0.7
PARVB-204ENST00000406477 TSGA10IPQ3SY00 556 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 VPS53Q5VIR6 699 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 USPL1Q5W0Q7 1092 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 VGLL2Q8N8G2 317 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 ZSWIM6Q9HCJ5 1215 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
PARVB-204ENST00000406477 CYP46A1Q9Y6A2 500 aa19.43■□□□□ 0.7
PARVB-204ENST00000406477 FAM177BA6PVY3 158 aa19.42■□□□□ 0.7
PARVB-204ENST00000406477 SLC27A2O14975 620 aa19.42■□□□□ 0.7
PARVB-204ENST00000406477 RNF113AO15541 343 aaKnown RBP19.42■□□□□ 0.7
PARVB-204ENST00000406477 LPIN2Q92539 896 aa19.42■□□□□ 0.7
PARVB-204ENST00000406477 TTC14Q96N46 770 aa19.42■□□□□ 0.7
PARVB-204ENST00000406477 CDC5LQ99459 802 aaKnown RBP19.42■□□□□ 0.7
PARVB-204ENST00000406477 BCL11BQ9C0K0 894 aaPredicted RBP19.42■□□□□ 0.7
PARVB-204ENST00000406477 ZPR1O75312 459 aa19.41■□□□□ 0.7
PARVB-204ENST00000406477 CASTP20810 708 aaKnown RBP19.41■□□□□ 0.7
PARVB-204ENST00000406477 ADORA1P30542 326 aa19.41■□□□□ 0.7
PARVB-204ENST00000406477 TTF1Q15361 905 aaPredicted RBP19.41■□□□□ 0.7
PARVB-204ENST00000406477 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
PARVB-204ENST00000406477 ZSCAN25Q6NSZ9 544 aa19.41■□□□□ 0.7
PARVB-204ENST00000406477 TNPO1Q92973 898 aaKnown RBP19.41■□□□□ 0.7
PARVB-204ENST00000406477 ZSCAN31Q96LW9 406 aaPredicted RBP19.41■□□□□ 0.7
PARVB-204ENST00000406477 JAKMIP1Q96N16 626 aaKnown RBP19.41■□□□□ 0.7
PARVB-204ENST00000406477 QTRT2Q9H974 415 aaKnown RBP19.41■□□□□ 0.7
PARVB-204ENST00000406477 SLC5A1P13866 664 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 SCN7AQ01118 1682 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 SF3B3Q15393 1217 aaKnown RBP19.4■□□□□ 0.7
PARVB-204ENST00000406477 SLC10A5Q5PT55 438 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 ZNF589Q86UQ0 364 aaPredicted RBP19.4■□□□□ 0.7
PARVB-204ENST00000406477 LIMCH1Q9UPQ0 1083 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 GNPATO15228 680 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 FKBP4Q02790 459 aaKnown RBP eCLIP19.4■□□□□ 0.7
PARVB-204ENST00000406477 CLEC17AQ6ZS10 378 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 RUFY3Q7L099 469 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 DSCC1Q9BVC3 393 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 PDRG1Q9NUG6 133 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 NDUFB9Q9Y6M9 179 aa19.4■□□□□ 0.7
PARVB-204ENST00000406477 LY75O60449 1722 aa19.39■□□□□ 0.69
PARVB-204ENST00000406477 FGFR2P21802 821 aa19.39■□□□□ 0.69
PARVB-204ENST00000406477 GTF2E1P29083 439 aaPredicted RBP19.39■□□□□ 0.69
PARVB-204ENST00000406477 ANKRD1Q15327 319 aa19.39■□□□□ 0.69
PARVB-204ENST00000406477 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.39■□□□□ 0.69
PARVB-204ENST00000406477 ALDH8A1Q9H2A2 487 aaPredicted RBP19.39■□□□□ 0.69
PARVB-204ENST00000406477 DDX60Q8IY21 1712 aaKnown RBP19.39■□□□□ 0.69
PARVB-204ENST00000406477 GOLGA6L22H0YM25 854 aa19.38■□□□□ 0.69
PARVB-204ENST00000406477 FAM196AQ6ZSG2 479 aa19.38■□□□□ 0.69
PARVB-204ENST00000406477 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
PARVB-204ENST00000406477 SH2B1Q9NRF2 756 aaPredicted RBP19.38■□□□□ 0.69
PARVB-204ENST00000406477 SBF2Q86WG5 1849 aa19.38■□□□□ 0.69
PARVB-204ENST00000406477 RPAP1Q9BWH6 1393 aaPredicted RBP19.37■□□□□ 0.69
PARVB-204ENST00000406477 ARID4AP29374 1257 aaPredicted RBP19.37■□□□□ 0.69
PARVB-204ENST00000406477 AK2P54819 239 aa19.37■□□□□ 0.69
PARVB-204ENST00000406477 BLOC1S2Q6QNY1 142 aa19.37■□□□□ 0.69
PARVB-204ENST00000406477 ADRA2BP18089 450 aa19.36■□□□□ 0.69
PARVB-204ENST00000406477 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.36■□□□□ 0.69
PARVB-204ENST00000406477 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
PARVB-204ENST00000406477 ZAP70P43403 619 aa19.36■□□□□ 0.69
PARVB-204ENST00000406477 KCNQ4P56696 695 aa19.36■□□□□ 0.69
PARVB-204ENST00000406477 ERFEQ4G0M1 354 aa19.36■□□□□ 0.69
PARVB-204ENST00000406477 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
PARVB-204ENST00000406477 TBC1D9BQ66K14 1250 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms