RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 TGFB2P61812 414 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 LRRC24Q50LG9 513 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 TAF7LQ5H9L4 462 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 LDHAL6AQ6ZMR3 332 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 KLHDC4Q8TBB5 520 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 RPGRQ92834 1020 aaKnown RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 TTC41PQ6P2S7 1318 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 TFCP2Q12800 502 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 C15orf52Q6ZUT6 534 aaKnown RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 CLASRPQ8N2M8 674 aaKnown RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.43□□□□□ -1.06
USP16-203ENST00000399975 ANKRD2Q9GZV1 360 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 NPHP1O15259 732 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 OS9Q13438 667 aaPredicted RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 GRIPAP1Q4V328 841 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 TICAM2Q86XR7 235 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 CELF1Q92879 486 aaKnown RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 ZNF512BQ96KM6 892 aaPredicted RBP8.43□□□□□ -1.06
USP16-203ENST00000399975 CEP126Q9P2H0 1117 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 CD2APQ9Y5K6 639 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 CACNA1SQ13698 1873 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 PDE8BO95263 885 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 SP8Q8IXZ3 490 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 MPHOSPH8Q99549 860 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 LNPKQ9C0E8 428 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 CNNM1Q9NRU3 951 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 PODXL2Q9NZ53 605 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 SNED1Q8TER0 1413 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 SMARCA5O60264 1052 aaPredicted RBP8.42□□□□□ -1.06
USP16-203ENST00000399975 SIL1Q9H173 461 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 MINPP1Q9UNW1 487 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 IRS2Q9Y4H2 1338 aa8.42□□□□□ -1.06
USP16-203ENST00000399975 SLX4Q8IY92 1834 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 H0YIN7 160 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 UBE4AQ14139 1066 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 PUM3Q15397 648 aaKnown RBP8.41□□□□□ -1.06
USP16-203ENST00000399975 C2CD5Q86YS7 1000 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 CNKSR1Q969H4 720 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 EAF2Q96CJ1 260 aaPredicted RBP8.41□□□□□ -1.06
USP16-203ENST00000399975 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.41□□□□□ -1.06
USP16-203ENST00000399975 DUOX1Q9NRD9 1551 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 PDE1AP54750 535 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 CHRNDQ07001 517 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 METTL24Q5JXM2 366 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 LPIN2Q92539 896 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 CCDC85AQ96PX6 553 aaPredicted RBP8.41□□□□□ -1.06
USP16-203ENST00000399975 LEMD3Q9Y2U8 911 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 ATP6V0A2Q9Y487 856 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 AK9Q5TCS8 1911 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 AKAP11Q9UKA4 1901 aa8.41□□□□□ -1.06
USP16-203ENST00000399975 ZBTB7AO95365 584 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 MX1P20591 662 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 PPEF1O14829 653 aaPredicted RBP8.4□□□□□ -1.06
USP16-203ENST00000399975 IFIT2P09913 472 aaKnown RBP8.4□□□□□ -1.06
USP16-203ENST00000399975 KCNA3P22001 575 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 BMP2KLQ5H9B9 411 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 AACSQ86V21 672 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 C16orf71Q8IYS4 520 aaPredicted RBP8.4□□□□□ -1.06
USP16-203ENST00000399975 PI4K2BQ8TCG2 481 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 C7orf43Q8WVR3 580 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 GPATCH3Q96I76 525 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 DOCK2Q92608 1830 aa8.4□□□□□ -1.06
USP16-203ENST00000399975 ATP5JP18859 108 aa8.4□□□□□ -1.07
USP16-203ENST00000399975 ATP2B3Q16720 1220 aa8.4□□□□□ -1.07
USP16-203ENST00000399975 TTC22Q5TAA0 569 aa8.4□□□□□ -1.07
USP16-203ENST00000399975 SPON1Q9HCB6 807 aa8.4□□□□□ -1.07
USP16-203ENST00000399975 IL1RAPL2Q9NP60 686 aa8.4□□□□□ -1.07
USP16-203ENST00000399975 ECHDC1Q9NTX5 307 aa8.4□□□□□ -1.07
USP16-203ENST00000399975 XDHP47989 1333 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 PDS5AQ29RF7 1337 aaKnown RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 A0A1B0GUL7 405 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 SOCS7O14512 581 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 IGSF3O75054 1194 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 SLC5A1P13866 664 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 ATP2B4P23634 1241 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 MYH13Q9UKX3 1938 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 RFX7Q2KHR2 1363 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 ZNF804BA4D1E1 1349 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 ERC2O15083 957 aa8.39□□□□□ -1.07
USP16-203ENST00000399975 GLRX3O76003 335 aaKnown RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 OTUD7AQ8TE49 926 aaPredicted RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 RTFDC1Q9BY42 306 aaPredicted RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 ZNF646O15015 1829 aaPredicted RBP8.39□□□□□ -1.07
USP16-203ENST00000399975 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
USP16-203ENST00000399975 IFIT1P09914 478 aaKnown RBP8.38□□□□□ -1.07
USP16-203ENST00000399975 ARID4AP29374 1257 aaPredicted RBP8.38□□□□□ -1.07
USP16-203ENST00000399975 PSME4Q14997 1843 aa8.38□□□□□ -1.07
USP16-203ENST00000399975 XAGE2Q96GT9 111 aa8.38□□□□□ -1.07
USP16-203ENST00000399975 VPS33BQ9H267 617 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms