RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 RTN1Q16799 776 aa19.91■□□□□ 0.78
MCF2L-208ENST00000397030 JADE2Q9NQC1 790 aa19.91■□□□□ 0.78
MCF2L-208ENST00000397030 TTC21BQ7Z4L5 1316 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 MSL1Q68DK7 614 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 CCDC24Q8N4L8 307 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 UFL1O94874 794 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 LDHBP07195 334 aaKnown RBP19.9■□□□□ 0.78
MCF2L-208ENST00000397030 RNF187Q5TA31 235 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-208ENST00000397030 FNBP4Q8N3X1 1017 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-208ENST00000397030 PIK3R4Q99570 1358 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 A0A1W2PRG0 241 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 CSPG5O95196 566 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 SLC9C2Q5TAH2 1124 aa19.9■□□□□ 0.78
MCF2L-208ENST00000397030 APBA3O96018 575 aa19.89■□□□□ 0.78
MCF2L-208ENST00000397030 MCM5P33992 734 aa19.89■□□□□ 0.78
MCF2L-208ENST00000397030 TCIRG1Q13488 830 aa19.89■□□□□ 0.78
MCF2L-208ENST00000397030 GDPD2Q9HCC8 539 aa19.89■□□□□ 0.78
MCF2L-208ENST00000397030 CHMP2AO43633 222 aa19.89■□□□□ 0.77
MCF2L-208ENST00000397030 SLFN5Q08AF3 891 aa19.89■□□□□ 0.77
MCF2L-208ENST00000397030 PPP4R3BQ5MIZ7 849 aa19.89■□□□□ 0.77
MCF2L-208ENST00000397030 PLIN2Q99541 437 aa19.89■□□□□ 0.77
MCF2L-208ENST00000397030 LIMCH1Q9UPQ0 1083 aa19.89■□□□□ 0.77
MCF2L-208ENST00000397030 IRS4O14654 1257 aaPredicted RBP19.89■□□□□ 0.77
MCF2L-208ENST00000397030 FAM98CQ17RN3 349 aaKnown RBP19.89■□□□□ 0.77
MCF2L-208ENST00000397030 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
MCF2L-208ENST00000397030 SHTN1A0MZ66 631 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 ZBTB43O43298 467 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
MCF2L-208ENST00000397030 SCAND2PQ9GZW5 306 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-208ENST00000397030 PTPN14Q15678 1187 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 NOS1P29475 1434 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 TRAF1Q13077 416 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 LARGE2Q8N3Y3 721 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 HAUS7Q99871 368 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 NBPF7P0C2Y1 421 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-208ENST00000397030 GPCPD1Q9NPB8 672 aa19.88■□□□□ 0.77
MCF2L-208ENST00000397030 LMBR1LQ6UX01 489 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 ASIC1P78348 528 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 NFATC2IPQ8NCF5 419 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 ALDH1L2Q3SY69 923 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 NACA2Q9H009 215 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 ODF2LQ9ULJ1 636 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 PTPRCP08575 1304 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 KIAA0753Q2KHM9 967 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 MAP9Q49MG5 647 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 CCDC183Q5T5S1 534 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 SPAG5Q96R06 1193 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 ALG1Q9BT22 464 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 SREK1Q8WXA9 508 aaKnown RBP19.87■□□□□ 0.77
MCF2L-208ENST00000397030 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
MCF2L-208ENST00000397030 MYCLP12524 364 aaPredicted RBP19.86■□□□□ 0.77
MCF2L-208ENST00000397030 CCDC172P0C7W6 258 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 PTPDC1A2A3K4 754 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 RASA3Q14644 834 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 PSMC4P43686 418 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 TICAM2Q86XR7 235 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 NOP56O00567 594 aaKnown RBP19.86■□□□□ 0.77
MCF2L-208ENST00000397030 KMT5BQ4FZB7 885 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 BRPF3Q9ULD4 1205 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 PLCB3Q01970 1234 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 BRDTQ58F21 947 aaPredicted RBP19.86■□□□□ 0.77
MCF2L-208ENST00000397030 TRIM6Q9C030 488 aaPredicted RBP19.86■□□□□ 0.77
MCF2L-208ENST00000397030 BCS1LQ9Y276 419 aa19.86■□□□□ 0.77
MCF2L-208ENST00000397030 H0YIN7 160 aa19.85■□□□□ 0.77
MCF2L-208ENST00000397030 DDX39AO00148 427 aaKnown RBP19.85■□□□□ 0.77
MCF2L-208ENST00000397030 CHST3Q7LGC8 479 aa19.85■□□□□ 0.77
MCF2L-208ENST00000397030 NAA15Q9BXJ9 866 aaKnown RBP19.85■□□□□ 0.77
MCF2L-208ENST00000397030 CNGA1P29973 690 aa19.85■□□□□ 0.77
MCF2L-208ENST00000397030 DENND4BO75064 1496 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-208ENST00000397030 NECAB1Q8N987 351 aa19.85■□□□□ 0.77
MCF2L-208ENST00000397030 IQCGQ9H095 443 aaKnown RBP19.85■□□□□ 0.77
MCF2L-208ENST00000397030 CCDC141Q6ZP82 1450 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 GABPAQ06546 454 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 MCM7P33993 719 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 SNX16P57768 344 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 GBP3Q9H0R5 595 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 KRT5P13647 590 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 TCEANC2Q96MN5 208 aa19.84■□□□□ 0.77
MCF2L-208ENST00000397030 KIF4AO95239 1232 aa19.83■□□□□ 0.77
MCF2L-208ENST00000397030 MXRA7P84157 204 aa19.83■□□□□ 0.77
MCF2L-208ENST00000397030 ABCC5O15440 1437 aa19.83■□□□□ 0.77
MCF2L-208ENST00000397030 FCHSD1Q86WN1 690 aa19.83■□□□□ 0.77
MCF2L-208ENST00000397030 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.83■□□□□ 0.77
MCF2L-208ENST00000397030 UIMC1Q96RL1 719 aa19.83■□□□□ 0.77
MCF2L-208ENST00000397030 TTC12Q9H892 705 aaPredicted RBP19.83■□□□□ 0.77
MCF2L-208ENST00000397030 KIF14Q15058 1648 aa19.83■□□□□ 0.77
MCF2L-208ENST00000397030 N4BP3O15049 544 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 SLU7O95391 586 aaKnown RBP19.83■□□□□ 0.76
MCF2L-208ENST00000397030 ARHGAP27Q6ZUM4 889 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 SKAP1Q86WV1 359 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 ZKSCAN3Q9BRR0 538 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 GIMAP7Q8NHV1 300 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 CNNM2Q9H8M5 875 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 RMND1Q9NWS8 449 aa19.83■□□□□ 0.76
MCF2L-208ENST00000397030 ANKRD2Q9GZV1 360 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 ZSWIM4Q9H7M6 989 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 SORBS3O60504 671 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 FAM47CQ5HY64 1035 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 MAEAQ7L5Y9 396 aa19.82■□□□□ 0.76
MCF2L-208ENST00000397030 PTGS1P23219 599 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms