RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TPM3P06753 285 aa16.44■□□□□ 0.22
NUP98-204ENST00000397004 TNNT1P13805 278 aa16.44■□□□□ 0.22
NUP98-204ENST00000397004 MYH15Q9Y2K3 1946 aa16.44■□□□□ 0.22
NUP98-204ENST00000397004 ANKRD1Q15327 319 aa16.44■□□□□ 0.22
NUP98-204ENST00000397004 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
NUP98-204ENST00000397004 NCOA5Q9HCD5 579 aaKnown RBP16.44■□□□□ 0.22
NUP98-204ENST00000397004 HIP1O00291 1037 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 GCP02774 474 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
NUP98-204ENST00000397004 LRRC8AQ8IWT6 810 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 ENGASEQ8NFI3 743 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 XAGE3Q8WTP9 111 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 ATP5JP18859 108 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 DRC7Q8IY82 874 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 NEDD4P46934 1319 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 GOLGA6L6A8MZA4 724 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 MYD88Q99836 296 aa16.43■□□□□ 0.22
NUP98-204ENST00000397004 RNF20Q5VTR2 975 aa16.42■□□□□ 0.22
NUP98-204ENST00000397004 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
NUP98-204ENST00000397004 ANKRD24Q8TF21 1146 aa16.42■□□□□ 0.22
NUP98-204ENST00000397004 ORAI2Q96SN7 254 aa16.42■□□□□ 0.22
NUP98-204ENST00000397004 RGPD5Q99666 1765 aa16.42■□□□□ 0.22
NUP98-204ENST00000397004 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
NUP98-204ENST00000397004 KDM6AO15550 1401 aaPredicted RBP16.42■□□□□ 0.22
NUP98-204ENST00000397004 GOLGA6L4A6NEF3 574 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 CCZ1BP86790 482 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
NUP98-204ENST00000397004 ESCO1Q5FWF5 840 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 GPHNQ9NQX3 736 aaPredicted RBP16.41■□□□□ 0.22
NUP98-204ENST00000397004 APOBRQ0VD83 1088 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
NUP98-204ENST00000397004 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 TRPM3Q9HCF6 1732 aaPredicted RBP16.41■□□□□ 0.22
NUP98-204ENST00000397004 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.41■□□□□ 0.22
NUP98-204ENST00000397004 RCOR1Q9UKL0 485 aa16.41■□□□□ 0.22
NUP98-204ENST00000397004 SMTNL1A8MU46 457 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 AMOTQ4VCS5 1084 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 SALL1Q9NSC2 1324 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
NUP98-204ENST00000397004 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 NYAP1Q6ZVC0 841 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 SARM1Q6SZW1 724 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
NUP98-204ENST00000397004 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.4■□□□□ 0.22
NUP98-204ENST00000397004 V9GYY5 206 aaPredicted RBP16.4■□□□□ 0.22
NUP98-204ENST00000397004 STRCQ7RTU9 1775 aa16.4■□□□□ 0.22
NUP98-204ENST00000397004 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.22
NUP98-204ENST00000397004 PSME1Q06323 249 aa16.39■□□□□ 0.22
NUP98-204ENST00000397004 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.22
NUP98-204ENST00000397004 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.22
NUP98-204ENST00000397004 XIRP1Q702N8 1843 aaKnown RBP16.39■□□□□ 0.21
NUP98-204ENST00000397004 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 PFKFB2O60825 505 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
NUP98-204ENST00000397004 FDPSP14324 419 aaKnown RBP16.39■□□□□ 0.21
NUP98-204ENST00000397004 CASP7P55210 303 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
NUP98-204ENST00000397004 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 OVOS2A0A0G2JMS6 1433 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 CAMTA1Q9Y6Y1 1673 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 LRRN4CLQ8ND94 238 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
NUP98-204ENST00000397004 HAUS7Q99871 368 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
NUP98-204ENST00000397004 CDC25BP30305 580 aa16.38■□□□□ 0.21
NUP98-204ENST00000397004 CHAF1AQ13111 956 aaPredicted RBP16.38■□□□□ 0.21
NUP98-204ENST00000397004 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
NUP98-204ENST00000397004 FOXP2O15409 715 aa16.38■□□□□ 0.21
NUP98-204ENST00000397004 RABL6Q3YEC7 729 aaPredicted RBP16.38■□□□□ 0.21
NUP98-204ENST00000397004 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
NUP98-204ENST00000397004 AGXT2Q9BYV1 514 aa16.38■□□□□ 0.21
NUP98-204ENST00000397004 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
NUP98-204ENST00000397004 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
NUP98-204ENST00000397004 MCMDC2Q4G0Z9 681 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 NKX2-3Q8TAU0 364 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 TRMT1Q9NXH9 659 aaKnown RBP16.37■□□□□ 0.21
NUP98-204ENST00000397004 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
NUP98-204ENST00000397004 H3BQV1 296 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
NUP98-204ENST00000397004 KMT5BQ4FZB7 885 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 ZNF592Q92610 1267 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
NUP98-204ENST00000397004 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 KIF1AQ12756 1690 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms