RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 COL4A1P02462 1669 aa12.19□□□□□ -0.46
DDX39B-202ENST00000396172 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
DDX39B-202ENST00000396172 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
DDX39B-202ENST00000396172 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
DDX39B-202ENST00000396172 BSDC1Q9NW68 430 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-202ENST00000396172 BBOX1O75936 387 aa12.18□□□□□ -0.46
DDX39B-202ENST00000396172 TMX4Q9H1E5 349 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-202ENST00000396172 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 RHPN1Q8TCX5 695 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 ZNF594Q96JF6 807 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-202ENST00000396172 CHD4Q14839 1912 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 ZNF609O15014 1411 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 METTL24Q5JXM2 366 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 ANKRD45Q5TZF3 282 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
DDX39B-202ENST00000396172 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 GPR108Q9NPR9 543 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
DDX39B-202ENST00000396172 MYH7P12883 1935 aa12.16□□□□□ -0.46
DDX39B-202ENST00000396172 PPEF1O14829 653 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-202ENST00000396172 NUCB1Q02818 461 aa12.16□□□□□ -0.46
DDX39B-202ENST00000396172 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
DDX39B-202ENST00000396172 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
DDX39B-202ENST00000396172 ZNF622Q969S3 477 aaKnown RBP eCLIP12.16□□□□□ -0.464e-14■□□□□ 11.2
DDX39B-202ENST00000396172 APBB1O00213 710 aa12.16□□□□□ -0.46
DDX39B-202ENST00000396172 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
DDX39B-202ENST00000396172 PPP1R1BQ9UD71 204 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-202ENST00000396172 RIPOR2Q9Y4F9 1068 aa12.16□□□□□ -0.46
DDX39B-202ENST00000396172 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
DDX39B-202ENST00000396172 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
DDX39B-202ENST00000396172 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.47
DDX39B-202ENST00000396172 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 GPATCH3Q96I76 525 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 PUS3Q9BZE2 481 aaKnown RBP12.14□□□□□ -0.47
DDX39B-202ENST00000396172 XDHP47989 1333 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 SASH1O94885 1247 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 CHRNA5P30532 468 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 CHRNDQ07001 517 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 PUM3Q15397 648 aaKnown RBP12.14□□□□□ -0.47
DDX39B-202ENST00000396172 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 PSME4Q14997 1843 aa12.14□□□□□ -0.47
DDX39B-202ENST00000396172 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
DDX39B-202ENST00000396172 PDE8BO95263 885 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 TFCP2Q12800 502 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
DDX39B-202ENST00000396172 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 AKAP11Q9UKA4 1901 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
DDX39B-202ENST00000396172 SLC5A1P13866 664 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 DPEP1P16444 411 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 KCNJ4P48050 445 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 TNNI3KQ59H18 835 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
DDX39B-202ENST00000396172 DUOX1Q9NRD9 1551 aa12.12□□□□□ -0.47
DDX39B-202ENST00000396172 UBE4AQ14139 1066 aa12.12□□□□□ -0.47
DDX39B-202ENST00000396172 AACSQ86V21 672 aa12.12□□□□□ -0.47
DDX39B-202ENST00000396172 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
DDX39B-202ENST00000396172 LEMD3Q9Y2U8 911 aa12.12□□□□□ -0.47
DDX39B-202ENST00000396172 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
DDX39B-202ENST00000396172 LPIN2Q92539 896 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 ANKIB1Q9P2G1 1089 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 AOX1Q06278 1338 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 A0A0G2JLW4 131 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 A0A1B0GUL7 405 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-202ENST00000396172 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
DDX39B-202ENST00000396172 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
DDX39B-202ENST00000396172 SBF1O95248 1867 aa12.1□□□□□ -0.47
DDX39B-202ENST00000396172 ERC2O15083 957 aa12.1□□□□□ -0.47
DDX39B-202ENST00000396172 MX1P20591 662 aa12.1□□□□□ -0.47
DDX39B-202ENST00000396172 KCNA3P22001 575 aa12.1□□□□□ -0.47
DDX39B-202ENST00000396172 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
DDX39B-202ENST00000396172 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
DDX39B-202ENST00000396172 MAST2Q6P0Q8 1798 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 FGFR2P21802 821 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 DPP8Q6V1X1 898 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-202ENST00000396172 MPNDQ8N594 471 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 EAF2Q96CJ1 260 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-202ENST00000396172 NEUROD6Q96NK8 337 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 EYA3Q99504 573 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-202ENST00000396172 ZNF804BA4D1E1 1349 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
DDX39B-202ENST00000396172 MYO5AQ9Y4I1 1855 aaKnown RBP12.09□□□□□ -0.47
DDX39B-202ENST00000396172 TAF5LO75529 589 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms