RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 AFMP43652 599 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 RRAGBQ5VZM2 374 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 JDP2Q8WYK2 163 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 ZNF354CQ86Y25 554 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 ALDH1L1O75891 902 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 SYKP43405 635 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 RALGAPBQ86X10 1494 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 USP37Q86T82 979 aa11.88□□□□□ -0.51
COL4A6-203ENST00000394872 NEMFO60524 1076 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 KRT13P13646 458 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 SMC1AQ14683 1233 aaKnown RBP11.87□□□□□ -0.51
COL4A6-203ENST00000394872 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 SPECC1Q5M775 1068 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 TTC16Q8NEE8 873 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
COL4A6-203ENST00000394872 BMP15O95972 392 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 B4DLN1 442 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 ACTN2P35609 894 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 MRPL12P52815 198 aaKnown RBP11.87□□□□□ -0.51
COL4A6-203ENST00000394872 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
COL4A6-203ENST00000394872 Q6ZUG5 572 aa11.87□□□□□ -0.51
COL4A6-203ENST00000394872 RBM8AQ9Y5S9 174 aaKnown RBP11.87□□□□□ -0.51
COL4A6-203ENST00000394872 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 N4BP3O15049 544 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 IFI16Q16666 785 aaKnown RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 TSNARE1Q96NA8 513 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 SDSP20132 328 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 NUCB1Q02818 461 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 MAGEB6Q8N7X4 407 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 HOMER2Q9NSB8 354 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 RPRD2Q5VT52 1461 aaKnown RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 SPDYE3A6NKU9 549 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 UBE2HP62256 183 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 PLCG2P16885 1265 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 LMOD1P29536 600 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 EYA3Q99504 573 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 JADE2Q9NQC1 790 aa11.86□□□□□ -0.51
COL4A6-203ENST00000394872 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
COL4A6-203ENST00000394872 GIGYF2Q6Y7W6 1299 aaKnown RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 MCM9Q9NXL9 1143 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 DNAJC5BQ9UF47 199 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 GNAT2P19087 354 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 NCBP1Q09161 790 aaKnown RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 SSX2IPQ9Y2D8 614 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 IGHDP01880 384 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 C16orf45Q96MC5 204 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ANKRD2Q9GZV1 360 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 MIGA1Q8NAN2 632 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 A2MP01023 1474 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 SBNO2Q9Y2G9 1366 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
COL4A6-203ENST00000394872 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-203ENST00000394872 ADCY5O95622 1261 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 ZNF165P49910 485 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 TCHPQ9BT92 498 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 MRVI1Q9Y6F6 885 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-203ENST00000394872 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
COL4A6-203ENST00000394872 RGS22Q8NE09 1264 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 LRRC45Q96CN5 670 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 GOLGA6L9A6NEM1 432 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 LDHBP07195 334 aaKnown RBP11.84□□□□□ -0.51
COL4A6-203ENST00000394872 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
COL4A6-203ENST00000394872 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 ASIC1P78348 528 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-203ENST00000394872 KCNG4Q8TDN1 519 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 SPAG5Q96R06 1193 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 CGNQ9P2M7 1197 aaKnown RBP11.84□□□□□ -0.51
COL4A6-203ENST00000394872 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 LMTK3Q96Q04 1460 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 PDE1AP54750 535 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
COL4A6-203ENST00000394872 TMX3Q96JJ7 454 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms