RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 TFCP2Q12800 502 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 ELF2Q15723 593 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 KIF18AQ8NI77 898 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 ME1P48163 572 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 DHX40Q8IX18 779 aaKnown RBP16.4■□□□□ 0.22
CCDC57-203ENST00000392343 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 PDIA4P13667 645 aaKnown RBP16.4■□□□□ 0.22
CCDC57-203ENST00000392343 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
CCDC57-203ENST00000392343 STX1AQ16623 288 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 MYD88Q99836 296 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 SNRKQ9NRH2 765 aa16.4■□□□□ 0.22
CCDC57-203ENST00000392343 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
CCDC57-203ENST00000392343 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 CCZ1BP86790 482 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 CCZ1P86791 482 aaPredicted RBP16.39■□□□□ 0.21
CCDC57-203ENST00000392343 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 CCDC73Q6ZRK6 1079 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 FSIP1Q8NA03 581 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 PODXL2Q9NZ53 605 aa16.39■□□□□ 0.21
CCDC57-203ENST00000392343 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
CCDC57-203ENST00000392343 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
CCDC57-203ENST00000392343 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-203ENST00000392343 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-203ENST00000392343 A0A1B0GVL5 298 aa16.38■□□□□ 0.21
CCDC57-203ENST00000392343 FBXO38Q6PIJ6 1188 aa16.38■□□□□ 0.21
CCDC57-203ENST00000392343 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
CCDC57-203ENST00000392343 MRFAP1L1Q96HT8 127 aa16.38■□□□□ 0.21
CCDC57-203ENST00000392343 BIN1O00499 593 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 KRT32Q14532 448 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 ZNF609O15014 1411 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
CCDC57-203ENST00000392343 CDC25BP30305 580 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 SYCP1Q15431 976 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
CCDC57-203ENST00000392343 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
CCDC57-203ENST00000392343 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
CCDC57-203ENST00000392343 PDIA6Q15084 440 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 COPS6Q7L5N1 327 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 CCAR2Q8N163 923 aaKnown RBP16.36■□□□□ 0.21
CCDC57-203ENST00000392343 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 SLFN14P0C7P3 912 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 TNNI3KQ59H18 835 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 FPGT-TNNI3KV9GXZ4 949 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 PXDNQ92626 1479 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
CCDC57-203ENST00000392343 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
CCDC57-203ENST00000392343 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-203ENST00000392343 RGPD2P0DJD1 1756 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 SMC2O95347 1197 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-203ENST00000392343 DDX21Q9NR30 783 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCDC57-203ENST00000392343 PHF8Q9UPP1 1060 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-203ENST00000392343 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 GCKRQ14397 625 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 UBE3BQ7Z3V4 1068 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
CCDC57-203ENST00000392343 ATP5JP18859 108 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 PSME1Q06323 249 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-203ENST00000392343 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-203ENST00000392343 ENGASEQ8NFI3 743 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 GJB4Q9NTQ9 266 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-203ENST00000392343 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 ERICH4A6NGS2 130 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 FAM160A1Q05DH4 1040 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 ERCC6LQ2NKX8 1250 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 DPCR1Q3MIW9 517 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 CEP57L1Q8IYX8 460 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 PCDHA7Q9UN72 937 aa16.34■□□□□ 0.21
CCDC57-203ENST00000392343 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.21
CCDC57-203ENST00000392343 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.21
CCDC57-203ENST00000392343 GOLIM4O00461 696 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms