RNA–Protein interactions for RNA: ENST00000379817.6

APTX-204, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 2,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-204ENST00000379817 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 RTL9Q8NET4 1388 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 MROH5Q6ZUA9 1318 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 GOLIM4O00461 696 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 GNPATO15228 680 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 PDE8BO95263 885 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
APTX-204ENST00000379817 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
APTX-204ENST00000379817 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 MED23Q9ULK4 1368 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 ZPR1O75312 459 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 NECTIN1Q15223 517 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 VGLL2Q8N8G2 317 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 KCNB2Q92953 911 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.4
APTX-204ENST00000379817 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
APTX-204ENST00000379817 ADORA1P30542 326 aa12.52□□□□□ -0.41
APTX-204ENST00000379817 MCMDC2Q4G0Z9 681 aa12.52□□□□□ -0.41
APTX-204ENST00000379817 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
APTX-204ENST00000379817 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
APTX-204ENST00000379817 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
APTX-204ENST00000379817 KCNJ4P48050 445 aa12.51□□□□□ -0.41
APTX-204ENST00000379817 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
APTX-204ENST00000379817 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
APTX-204ENST00000379817 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
APTX-204ENST00000379817 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
APTX-204ENST00000379817 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
APTX-204ENST00000379817 LY75O60449 1722 aa12.51□□□□□ -0.41
APTX-204ENST00000379817 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 IGHMBP2P38935 993 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 TBC1D9BQ66K14 1250 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 PRPF40BQ6NWY9 871 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 NYXQ9GZU5 481 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 RBM8AQ9Y5S9 174 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 TAF5LO75529 589 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
APTX-204ENST00000379817 SF3B3Q15393 1217 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 LPIN2Q92539 896 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 TM6SF1Q9BZW5 370 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
APTX-204ENST00000379817 SPEF2Q9C093 1822 aa12.5□□□□□ -0.41
APTX-204ENST00000379817 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
APTX-204ENST00000379817 SOCS7O14512 581 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 SSFA2P28290 1259 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 ZNF589Q86UQ0 364 aaPredicted RBP12.49□□□□□ -0.41
APTX-204ENST00000379817 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
APTX-204ENST00000379817 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
APTX-204ENST00000379817 LRP5O75197 1615 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 RNF113AO15541 343 aaKnown RBP12.49□□□□□ -0.41
APTX-204ENST00000379817 FGFR2P21802 821 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 RFC4P35249 363 aa12.49□□□□□ -0.41
APTX-204ENST00000379817 LAMB2P55268 1798 aa12.48□□□□□ -0.41
APTX-204ENST00000379817 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
APTX-204ENST00000379817 SLC5A1P13866 664 aa12.48□□□□□ -0.41
APTX-204ENST00000379817 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
APTX-204ENST00000379817 ZMYM1Q5SVZ6 1142 aa12.48□□□□□ -0.41
APTX-204ENST00000379817 ZNF772Q68DY9 489 aaPredicted RBP12.48□□□□□ -0.41
APTX-204ENST00000379817 TPTE2Q6XPS3 522 aa12.48□□□□□ -0.41
APTX-204ENST00000379817 HMG20BQ9P0W2 317 aa12.48□□□□□ -0.41
APTX-204ENST00000379817 SLC27A2O14975 620 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 HMGB2P26583 209 aaKnown RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 PSMA5P28066 241 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 NBPF5PQ86XG9 351 aaPredicted RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 TTC14Q96N46 770 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 SEC62Q99442 399 aaKnown RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 ZAP70P43403 619 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 CUL4AQ13619 759 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 SCARF1Q14162 830 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
APTX-204ENST00000379817 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
APTX-204ENST00000379817 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms