RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 CABP4P57796 275 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 DDX19AQ9NUU7 478 aaKnown RBP13.54□□□□□ -0.24
SEC23B-204ENST00000377475 TAF5LO75529 589 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 GPTP24298 496 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 TMEM131LA2VDJ0 1609 aa13.53□□□□□ -0.24
SEC23B-204ENST00000377475 PI16Q6UXB8 463 aa13.53□□□□□ -0.24
SEC23B-204ENST00000377475 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
SEC23B-204ENST00000377475 ZSWIM4Q9H7M6 989 aa13.53□□□□□ -0.24
SEC23B-204ENST00000377475 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
SEC23B-204ENST00000377475 TNNI3KQ59H18 835 aa13.53□□□□□ -0.24
SEC23B-204ENST00000377475 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
SEC23B-204ENST00000377475 FPGT-TNNI3KV9GXZ4 949 aa13.53□□□□□ -0.24
SEC23B-204ENST00000377475 GCKRQ14397 625 aa13.52□□□□□ -0.24
SEC23B-204ENST00000377475 ZNF790Q6PG37 636 aa13.52□□□□□ -0.24
SEC23B-204ENST00000377475 KAZALD1Q96I82 304 aa13.52□□□□□ -0.24
SEC23B-204ENST00000377475 MCMDC2Q4G0Z9 681 aa13.52□□□□□ -0.25
SEC23B-204ENST00000377475 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
SEC23B-204ENST00000377475 IDH1O75874 414 aaKnown RBP13.52□□□□□ -0.25
SEC23B-204ENST00000377475 SKIDA1Q1XH10 827 aa13.52□□□□□ -0.25
SEC23B-204ENST00000377475 CLSTN2Q9H4D0 955 aa13.52□□□□□ -0.25
SEC23B-204ENST00000377475 NEURL1BA8MQ27 555 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 SERPINC1P01008 464 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 A1BGP04217 495 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-204ENST00000377475 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-204ENST00000377475 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 CEP57L1Q8IYX8 460 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 MYL10Q9BUA6 226 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC23B-204ENST00000377475 IFNKQ9P0W0 207 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-204ENST00000377475 ALDH1L1O75891 902 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 TERF1P54274 439 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 ELF2Q15723 593 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
SEC23B-204ENST00000377475 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
SEC23B-204ENST00000377475 AOX1Q06278 1338 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 POLR3GO15318 223 aaPredicted RBP13.5□□□□□ -0.25
SEC23B-204ENST00000377475 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 MTMR7Q9Y216 660 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 SYT10Q6XYQ8 523 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 GOLPH3LQ9H4A5 285 aa13.5□□□□□ -0.25
SEC23B-204ENST00000377475 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
SEC23B-204ENST00000377475 TPM3P06753 285 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
SEC23B-204ENST00000377475 KRT32Q14532 448 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 TTLL7Q6ZT98 887 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 STOX1Q6ZVD7 989 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 HELBQ8NG08 1087 aaPredicted RBP13.49□□□□□ -0.25
SEC23B-204ENST00000377475 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 PAG1Q9NWQ8 432 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 AMOTQ4VCS5 1084 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
SEC23B-204ENST00000377475 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
SEC23B-204ENST00000377475 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 NRDCO43847 1150 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 STX1AQ16623 288 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 CPLX3Q8WVH0 158 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 ZNF396Q96N95 335 aaPredicted RBP13.48□□□□□ -0.25
SEC23B-204ENST00000377475 FUCA2Q9BTY2 467 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 TM6SF1Q9BZW5 370 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 ST7Q9NRC1 585 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 URI1O94763 535 aaPredicted RBP13.48□□□□□ -0.25
SEC23B-204ENST00000377475 KCNH5Q8NCM2 988 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 PHKBQ93100 1093 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 CEP126Q9P2H0 1117 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 IQSEC3Q9UPP2 1182 aaPredicted RBP13.48□□□□□ -0.25
SEC23B-204ENST00000377475 PREX1Q8TCU6 1659 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
SEC23B-204ENST00000377475 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
SEC23B-204ENST00000377475 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
SEC23B-204ENST00000377475 NCBP1Q09161 790 aaKnown RBP13.47□□□□□ -0.25
SEC23B-204ENST00000377475 TRDNQ13061 729 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 SLC4A8Q2Y0W8 1093 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 DPCR1Q3MIW9 517 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 KLHL10Q6JEL2 608 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
SEC23B-204ENST00000377475 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 ANO10Q9NW15 660 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 DNAI1Q9UI46 699 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 CLIC4Q9Y696 253 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 SFPQP23246 707 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC23B-204ENST00000377475 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 TBX22Q9Y458 520 aa13.47□□□□□ -0.25
SEC23B-204ENST00000377475 NDUFA8P51970 172 aa13.46□□□□□ -0.25
SEC23B-204ENST00000377475 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms