RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 MAP7D2Q96T17 732 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 Q6ZUG5 572 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 PRIMPOLQ96LW4 560 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
ABCF1-202ENST00000376545 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 PFKFB2O60825 505 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 TYRO3Q06418 890 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
ABCF1-202ENST00000376545 DSCC1Q9BVC3 393 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 CLSTN2Q9H4D0 955 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 ZSCAN16Q9H4T2 348 aaPredicted RBP12.63□□□□□ -0.39
ABCF1-202ENST00000376545 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 CHGBP05060 677 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
ABCF1-202ENST00000376545 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
ABCF1-202ENST00000376545 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 NBPF10Q6P3W6 841 aaKnown RBP12.63□□□□□ -0.39
ABCF1-202ENST00000376545 CCDC129Q6ZRS4 1044 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 STOX1Q6ZVD7 989 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 NBPF15Q8N660 670 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
ABCF1-202ENST00000376545 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
ABCF1-202ENST00000376545 JAK2O60674 1132 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
ABCF1-202ENST00000376545 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 KIAA1524Q8TCG1 905 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 PIP4K2AP48426 406 aaPredicted RBP12.62□□□□□ -0.39
ABCF1-202ENST00000376545 HMGN5P82970 282 aaKnown RBP12.62□□□□□ -0.39
ABCF1-202ENST00000376545 SCRN1Q12765 414 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 LMBR1LQ6UX01 489 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 DACT1Q9NYF0 836 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
ABCF1-202ENST00000376545 STK3Q13188 491 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
ABCF1-202ENST00000376545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
ABCF1-202ENST00000376545 SALL1Q9NSC2 1324 aa12.61□□□□□ -0.39
ABCF1-202ENST00000376545 CABP4P57796 275 aa12.61□□□□□ -0.39
ABCF1-202ENST00000376545 NAA16Q6N069 864 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-202ENST00000376545 BRF1Q92994 677 aa12.61□□□□□ -0.39
ABCF1-202ENST00000376545 CTDNEP1O95476 244 aa12.61□□□□□ -0.39
ABCF1-202ENST00000376545 DHX32Q7L7V1 743 aaKnown RBP12.61□□□□□ -0.39
ABCF1-202ENST00000376545 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
ABCF1-202ENST00000376545 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
ABCF1-202ENST00000376545 TNS2Q63HR2 1409 aa12.61□□□□□ -0.39
ABCF1-202ENST00000376545 CIAO1O76071 339 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 NSUN7Q8NE18 718 aaKnown RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 TDRD7Q8NHU6 1098 aaKnown RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 TFIP11Q9UBB9 837 aaKnown RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 NR1I2O75469 434 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 IL15P40933 162 aaPredicted RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 PLA2G4DQ86XP0 818 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 CBX8Q9HC52 389 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 EVCP57679 992 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 FGD1P98174 961 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
ABCF1-202ENST00000376545 CAMK4Q16566 473 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
ABCF1-202ENST00000376545 XIRP1Q702N8 1843 aaKnown RBP12.59□□□□□ -0.39
ABCF1-202ENST00000376545 CAVIN2O95810 425 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.59□□□□□ -0.39
ABCF1-202ENST00000376545 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
ABCF1-202ENST00000376545 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
ABCF1-202ENST00000376545 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 MPNDQ8N594 471 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
ABCF1-202ENST00000376545 GOLGA6L6A8MZA4 724 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 ATF3P18847 181 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 PYCARDQ9ULZ3 195 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 MYH7P12883 1935 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 EYA2O00167 538 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
ABCF1-202ENST00000376545 TTLL7Q6ZT98 887 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
ABCF1-202ENST00000376545 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
ABCF1-202ENST00000376545 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-202ENST00000376545 CABLES1Q8TDN4 633 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 TOGARAM1Q9Y4F4 1720 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 GOLGA6L4A6NEF3 574 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 E7EWF7 191 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 CHRNA2Q15822 529 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 CKAP2LQ8IYA6 745 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-202ENST00000376545 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
ABCF1-202ENST00000376545 MAST3O60307 1309 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms