RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PPP1R21Q6ZMI0 780 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 ENAHQ8N8S7 591 aaPredicted RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 ANKRD24Q8TF21 1146 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 C10orf88Q9H8K7 445 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 VIMP08670 466 aaKnown RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 CNNM3Q8NE01 707 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 CNGA4Q8IV77 575 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 PARP2Q9UGN5 583 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 N4BP3O15049 544 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 OPHN1O60890 802 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 SLC30A9Q6PML9 568 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 CCDC42Q96M95 316 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 PDE6BP35913 854 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 DHX9Q08211 1270 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 GNL3LQ9NVN8 582 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 HARSP12081 509 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 VSIG1Q86XK7 387 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 BSDC1Q9NW68 430 aaPredicted RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 RIPOR2Q9Y4F9 1068 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.48□□□□□ -1.212e-9■■□□□ 12.4
UBR4-204ENST00000375254 RNF40O75150 1001 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 ESRRBO95718 433 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 CCDC62Q6P9F0 684 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 PALMDQ9NP74 551 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 PPP1R9AQ9ULJ8 1098 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 HCLS1P14317 486 aaPredicted RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 TEX11Q8IYF3 940 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 MOV10L1Q9BXT6 1211 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 SURF6O75683 361 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 MRPS25P82663 173 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 KLHDC4Q8TBB5 520 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 MYO1CO00159 1063 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 STXBP3O00186 592 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 SSFA2P28290 1259 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 PPP1R2P41236 205 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 WASHC4Q2M389 1173 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 ZNF830Q96NB3 372 aaPredicted RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 CCDC80Q76M96 950 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 MCUR1Q96AQ8 359 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 HAUS8Q9BT25 410 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 IQCA1LA6NCM1 817 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 KRT75O95678 551 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 CNGA1P29973 690 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 TMTC1Q8IUR5 882 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 NME8Q8N427 588 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 TUBA8Q9NY65 449 aaPredicted RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 UTP11Q9Y3A2 253 aaKnown RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 GFAPP14136 432 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 ATP2C2O75185 946 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 ZSCAN22P10073 491 aaPredicted RBP7.48□□□□□ -1.21
UBR4-204ENST00000375254 LMNB2Q03252 620 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 TYRO3Q06418 890 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
UBR4-204ENST00000375254 ACBD5Q5T8D3 534 aaPredicted RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 TMCO5AQ8N6Q1 288 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 TRIM58Q8NG06 486 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 MRFAP1Q9Y605 127 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 IRX5P78411 483 aaPredicted RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 RUFY3Q7L099 469 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 BAZ1BQ9UIG0 1483 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 UBTFL1P0CB47 393 aaPredicted RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 PTGS1P23219 599 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 ZC3H6P61129 1189 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 MIA2Q96PC5 1412 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 NUP58Q9BVL2 599 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 OAS2P29728 719 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 ZSCAN25Q6NSZ9 544 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 ARHGAP6O43182 974 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 PAK2Q13177 524 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 NUTM2DQ5VT03 806 aaPredicted RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 NUTM2AQ8IVF1 878 aaPredicted RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 ZNF148Q9UQR1 794 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 PPP1R7Q15435 360 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 KIF2CQ99661 725 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 RAB34Q9BZG1 259 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 DHX57Q6P158 1386 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 SUN1O94901 812 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 HOMER3Q9NSC5 361 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 GCFC2P16383 781 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 CUL3Q13618 768 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 CCDC43Q96MW1 224 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR4-204ENST00000375254 ARID3CA6NKF2 412 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 PSMC4P43686 418 aa7.47□□□□□ -1.21
UBR4-204ENST00000375254 ZC3H15Q8WU90 426 aaKnown RBP7.47□□□□□ -1.21
UBR4-204ENST00000375254 YY1P25490 414 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 PDE1CQ14123 709 aaPredicted RBP7.46□□□□□ -1.21
UBR4-204ENST00000375254 E2F4Q16254 413 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 TSNARE1Q96NA8 513 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 NAPGQ99747 312 aaPredicted RBP7.46□□□□□ -1.21
UBR4-204ENST00000375254 FBLN2P98095 1184 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 CAPRIN2Q6IMN6 1127 aaKnown RBP7.46□□□□□ -1.21
UBR4-204ENST00000375254 CNOT10Q9H9A5 744 aaKnown RBP7.46□□□□□ -1.21
UBR4-204ENST00000375254 PHACTR2O75167 634 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 CCDC96Q2M329 555 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 NOP53Q9NZM5 478 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms