RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 MINDY4BA8MYZ0 360 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 IFIT3O14879 490 aaKnown RBP9.48□□□□□ -0.89
HSPG2-203ENST00000374695 NBPF7P0C2Y1 421 aaPredicted RBP9.48□□□□□ -0.89
HSPG2-203ENST00000374695 FERMT3Q86UX7 667 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 TNNC1P63316 161 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 CCT6BQ92526 530 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 LRPPRCP42704 1394 aaKnown RBP9.48□□□□□ -0.89
HSPG2-203ENST00000374695 IFIT5Q13325 482 aaKnown RBP9.48□□□□□ -0.89
HSPG2-203ENST00000374695 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
HSPG2-203ENST00000374695 PPFIA3O75145 1194 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 VIMP08670 466 aaKnown RBP9.48□□□□□ -0.89
HSPG2-203ENST00000374695 BCAP29Q9UHQ4 241 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 SELENOSQ9BQE4 189 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 ANKIB1Q9P2G1 1089 aa9.48□□□□□ -0.89
HSPG2-203ENST00000374695 SKILP12757 684 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 TOM1L2Q6ZVM7 507 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 KRT23Q9C075 422 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 KAT6AQ92794 2004 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 ARHGAP25P42331 645 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 FAM200AQ8TCP9 573 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
HSPG2-203ENST00000374695 SH3BP5O60239 455 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 GBP7Q8N8V2 638 aaPredicted RBP9.47□□□□□ -0.89
HSPG2-203ENST00000374695 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 ABCF2Q9UG63 623 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 B4DLN1 442 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 MRPL12P52815 198 aaKnown RBP9.47□□□□□ -0.89
HSPG2-203ENST00000374695 CPLX3Q8WVH0 158 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 MTUS1Q9ULD2 1270 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 ZPR1O75312 459 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 CCDC26Q8TAB7 109 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 TTC36A6NLP5 189 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 NAA25Q14CX7 972 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 MFSD6Q6ZSS7 791 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 ZBTB17Q13105 803 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 VCX3AQ9NNX9 186 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 SAMM50Q9Y512 469 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.892e-7■■■□□ 17.3
HSPG2-203ENST00000374695 TMEM57Q8N5G2 664 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 PRPF31Q8WWY3 499 aaKnown RBP9.47□□□□□ -0.89
HSPG2-203ENST00000374695 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 ZFP91Q96JP5 570 aaPredicted RBP9.47□□□□□ -0.89
HSPG2-203ENST00000374695 ZKSCAN5Q9Y2L8 839 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 KIF1BO60333 1816 aa9.47□□□□□ -0.89
HSPG2-203ENST00000374695 PCK1P35558 622 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.89
HSPG2-203ENST00000374695 TBC1D31Q96DN5 1066 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 CDK19Q9BWU1 502 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 BMP2KLQ5H9B9 411 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 NSD2O96028 1365 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 KAT14Q9H8E8 782 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 CNNM2Q9H8M5 875 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 ANKRD12Q6UB98 2062 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 GJB2P29033 226 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 KCNH5Q8NCM2 988 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 MAK16Q9BXY0 300 aaKnown RBP9.46□□□□□ -0.89
HSPG2-203ENST00000374695 TOP2BQ02880 1626 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 TMEM67Q5HYA8 995 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 NCOA7Q8NI08 942 aa9.46□□□□□ -0.89
HSPG2-203ENST00000374695 HLA-DOAP06340 250 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.9
HSPG2-203ENST00000374695 CNGA4Q8IV77 575 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 NCAPD3P42695 1498 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 CRCPO75575 148 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 CALCOCO2Q13137 446 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 SPATS2Q86XZ4 545 aaKnown RBP9.46□□□□□ -0.9
HSPG2-203ENST00000374695 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 TCHPQ9BT92 498 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.46□□□□□ -0.9
HSPG2-203ENST00000374695 WDR78Q5VTH9 848 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 SYT1P21579 422 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 PPP1R7Q15435 360 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 NCAPGQ9BPX3 1015 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.9
HSPG2-203ENST00000374695 VPS52Q8N1B4 723 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 SEC62Q99442 399 aaKnown RBP9.46□□□□□ -0.9
HSPG2-203ENST00000374695 DNAI1Q9UI46 699 aa9.46□□□□□ -0.9
HSPG2-203ENST00000374695 RALGAPBQ86X10 1494 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 GSTO1P78417 241 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 TMTC2Q8N394 836 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 IDEP14735 1019 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 GNAQP50148 359 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 SEL1L2Q5TEA6 688 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 ATP6V1AP38606 617 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 TRIM14Q14142 442 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 RILPL1Q5EBL4 403 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 TAOK1Q7L7X3 1001 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 CCDC42Q96M95 316 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 RTL9Q8NET4 1388 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 IRX4P78413 519 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-203ENST00000374695 BUB1BO60566 1050 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-203ENST00000374695 VPS18Q9P253 973 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 PRAM1Q96QH2 718 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms