RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 CCDC144CPQ8IYA2 1237 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 EDC3Q96F86 508 aaKnown RBP8.85□□□□□ -0.99
GARNL3-202ENST00000373387 SPATA32Q96LK8 384 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 HAUS7Q99871 368 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 LLPHQ9BRT6 129 aaKnown RBP8.85□□□□□ -0.99
GARNL3-202ENST00000373387 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 FPGT-TNNI3KV9GXZ4 949 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 CHGBP05060 677 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 NCBP1Q09161 790 aaKnown RBP8.85□□□□□ -0.99
GARNL3-202ENST00000373387 CAMK4Q16566 473 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 RCOR1Q9UKL0 485 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 ERBB3P21860 1342 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 STRCP1A6NGW2 1772 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 KCPQ6ZWJ8 1503 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 ARAP2Q8WZ64 1704 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 LRMPQ12912 555 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 G3BP1Q13283 466 aaKnown RBP eCLIP8.85□□□□□ -0.99
GARNL3-202ENST00000373387 NSUN7Q8NE18 718 aaKnown RBP8.85□□□□□ -0.99
GARNL3-202ENST00000373387 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 FSD1Q9BTV5 496 aa8.85□□□□□ -0.99
GARNL3-202ENST00000373387 EVCP57679 992 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 ZNF790Q6PG37 636 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 NYAP1Q6ZVC0 841 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 CCDC186Q7Z3E2 898 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 GOLPH3LQ9H4A5 285 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 ZSCAN16Q9H4T2 348 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 SPC24Q8NBT2 197 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 CACTINQ8WUQ7 758 aaKnown RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 MRFAP1L1Q96HT8 127 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 NEK1Q96PY6 1258 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 SLC52A2Q9HAB3 445 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 FAM53CQ9NYF3 392 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 MYO5AQ9Y4I1 1855 aaKnown RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 DHX40Q8IX18 779 aaKnown RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 BRF1Q92994 677 aa8.84□□□□□ -0.99
GARNL3-202ENST00000373387 TFIP11Q9UBB9 837 aaKnown RBP8.84□□□□□ -0.99
GARNL3-202ENST00000373387 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -1
GARNL3-202ENST00000373387 CHD4Q14839 1912 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 SMTNL1A8MU46 457 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 DNTTIP2Q5QJE6 756 aaKnown RBP8.83□□□□□ -1
GARNL3-202ENST00000373387 Q6ZUG5 572 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
GARNL3-202ENST00000373387 U3KPZ7 1027 aaPredicted RBP8.83□□□□□ -1
GARNL3-202ENST00000373387 DOCK2Q92608 1830 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 NHSL1Q5SYE7 1610 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 SEC62Q99442 399 aaKnown RBP8.83□□□□□ -1
GARNL3-202ENST00000373387 DNAJC25Q9H1X3 360 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 ANKRD36CQ5JPF3 1778 aa8.83□□□□□ -1
GARNL3-202ENST00000373387 FOXP2O15409 715 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 ZNF165P49910 485 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 CCZ1BP86790 482 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 CCZ1P86791 482 aaPredicted RBP8.82□□□□□ -1
GARNL3-202ENST00000373387 TFCP2Q12800 502 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 ATL3Q6DD88 541 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 FOXO4P98177 505 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 MCMDC2Q4G0Z9 681 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 ATG9AQ7Z3C6 839 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 LRRC8AQ8IWT6 810 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 DSCC1Q9BVC3 393 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 SIL1Q9H173 461 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -18e-9■■■■■ 33.7
GARNL3-202ENST00000373387 C1orf167Q5SNV9 1468 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 LRP6O75581 1613 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 MYH3P11055 1940 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 PHKG2P15735 406 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 CCDC129Q6ZRS4 1044 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 KBTBD3Q8NAB2 608 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 XAGE3Q8WTP9 111 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 GPR108Q9NPR9 543 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 ABCA3Q99758 1704 aa8.82□□□□□ -1
GARNL3-202ENST00000373387 NBPF11Q86T75 865 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 CTNNA3Q9UI47 895 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 USP16Q9Y5T5 823 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 RGS22Q8NE09 1264 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 DBNDD2Q9BQY9 259 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 CTAGE5O15320 804 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 FDPSP14324 419 aaKnown RBP8.81□□□□□ -1
GARNL3-202ENST00000373387 STK3Q13188 491 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 COPS6Q7L5N1 327 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 FMR1NBQ8N0W7 255 aaPredicted RBP8.81□□□□□ -1
GARNL3-202ENST00000373387 DDX11Q96FC9 970 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 GTPBP4Q9BZE4 634 aaKnown RBP8.81□□□□□ -1
GARNL3-202ENST00000373387 HELLSQ9NRZ9 838 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 CFAP45Q9UL16 551 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
GARNL3-202ENST00000373387 A0A0G2JLW4 131 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 PSME1Q06323 249 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 ZMYM1Q5SVZ6 1142 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 DHX32Q7L7V1 743 aaKnown RBP8.8□□□□□ -1
GARNL3-202ENST00000373387 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
GARNL3-202ENST00000373387 FEZ1Q99689 392 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 MYD88Q99836 296 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms