RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 SMARCC2Q8TAQ2 1214 aa26.45■■□□□ 1.83
CCSER2-202ENST00000359979 BRF1Q92994 677 aa26.45■■□□□ 1.83
CCSER2-202ENST00000359979 KCNF1Q9H3M0 494 aa26.45■■□□□ 1.83
CCSER2-202ENST00000359979 CFAP45Q9UL16 551 aa26.45■■□□□ 1.83
CCSER2-202ENST00000359979 JARID2Q92833 1246 aaPredicted RBP26.45■■□□□ 1.82
CCSER2-202ENST00000359979 GPR108Q9NPR9 543 aa26.45■■□□□ 1.82
CCSER2-202ENST00000359979 HELLSQ9NRZ9 838 aa26.45■■□□□ 1.82
CCSER2-202ENST00000359979 PKD1L3Q7Z443 1732 aa26.45■■□□□ 1.82
CCSER2-202ENST00000359979 LAMB4A4D0S4 1761 aa26.44■■□□□ 1.82
CCSER2-202ENST00000359979 CYP27B1O15528 508 aa26.44■■□□□ 1.82
CCSER2-202ENST00000359979 CAVIN2O95810 425 aa26.44■■□□□ 1.82
CCSER2-202ENST00000359979 HSP90B1P14625 803 aaKnown RBP26.44■■□□□ 1.82
CCSER2-202ENST00000359979 CCDC129Q6ZRS4 1044 aa26.44■■□□□ 1.82
CCSER2-202ENST00000359979 TMEM94Q12767 1356 aa26.44■■□□□ 1.82
CCSER2-202ENST00000359979 H3BQV1 296 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 PFKFB2O60825 505 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 IFFO2Q5TF58 517 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 PGBD1Q96JS3 809 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 ANO6Q4KMQ2 910 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 SEC62Q99442 399 aaKnown RBP26.43■■□□□ 1.82
CCSER2-202ENST00000359979 DSCC1Q9BVC3 393 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 CBX8Q9HC52 389 aa26.43■■□□□ 1.82
CCSER2-202ENST00000359979 GLI3P10071 1580 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 ATP5J2-PTCD1G3V325 749 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 PTCD1O75127 700 aaKnown RBP26.42■■□□□ 1.82
CCSER2-202ENST00000359979 NAA16Q6N069 864 aaPredicted RBP26.42■■□□□ 1.82
CCSER2-202ENST00000359979 DDX46Q7L014 1031 aaKnown RBP26.42■■□□□ 1.82
CCSER2-202ENST00000359979 CKAP2LQ8IYA6 745 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 H7C1W4 665 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 CSB-PGBD3P0DP91 1061 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 LMBR1LQ6UX01 489 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 DHX32Q7L7V1 743 aaKnown RBP26.42■■□□□ 1.82
CCSER2-202ENST00000359979 LUZP1Q86V48 1076 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 C17orf53Q8N3J3 647 aaPredicted RBP26.42■■□□□ 1.82
CCSER2-202ENST00000359979 TDRD7Q8NHU6 1098 aaKnown RBP26.42■■□□□ 1.82
CCSER2-202ENST00000359979 BICD2Q8TD16 824 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 NDUFB9Q9Y6M9 179 aa26.42■■□□□ 1.82
CCSER2-202ENST00000359979 PIP4K2AP48426 406 aaPredicted RBP26.41■■□□□ 1.82
CCSER2-202ENST00000359979 CABP4P57796 275 aa26.41■■□□□ 1.82
CCSER2-202ENST00000359979 SCRN1Q12765 414 aa26.41■■□□□ 1.82
CCSER2-202ENST00000359979 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.41■■□□□ 1.82
CCSER2-202ENST00000359979 NR1I2O75469 434 aa26.4■■□□□ 1.82
CCSER2-202ENST00000359979 FOXO4P98177 505 aa26.4■■□□□ 1.82
CCSER2-202ENST00000359979 SPC24Q8NBT2 197 aa26.4■■□□□ 1.82
CCSER2-202ENST00000359979 KIF3AQ9Y496 699 aa26.4■■□□□ 1.82
CCSER2-202ENST00000359979 PARP4Q9UKK3 1724 aaKnown RBP26.4■■□□□ 1.82
CCSER2-202ENST00000359979 AGXT2Q9BYV1 514 aa26.4■■□□□ 1.82
CCSER2-202ENST00000359979 PYCARDQ9ULZ3 195 aa26.4■■□□□ 1.82
CCSER2-202ENST00000359979 STOX1Q6ZVD7 989 aa26.39■■□□□ 1.82
CCSER2-202ENST00000359979 VSIG10Q8N0Z9 540 aa26.39■■□□□ 1.82
CCSER2-202ENST00000359979 PAG1Q9NWQ8 432 aa26.39■■□□□ 1.82
CCSER2-202ENST00000359979 FGD1P98174 961 aa26.38■■□□□ 1.81
CCSER2-202ENST00000359979 ATL3Q6DD88 541 aa26.38■■□□□ 1.81
CCSER2-202ENST00000359979 ATG9AQ7Z3C6 839 aa26.38■■□□□ 1.81
CCSER2-202ENST00000359979 CHGBP05060 677 aa26.38■■□□□ 1.81
CCSER2-202ENST00000359979 NSUN7Q8NE18 718 aaKnown RBP26.38■■□□□ 1.81
CCSER2-202ENST00000359979 CHMP4CQ96CF2 233 aa26.38■■□□□ 1.81
CCSER2-202ENST00000359979 IL15P40933 162 aaPredicted RBP26.37■■□□□ 1.81
CCSER2-202ENST00000359979 EXOSC10Q01780 885 aaKnown RBP26.37■■□□□ 1.81
CCSER2-202ENST00000359979 ZMYM1Q5SVZ6 1142 aa26.37■■□□□ 1.81
CCSER2-202ENST00000359979 PLA2G4DQ86XP0 818 aa26.37■■□□□ 1.81
CCSER2-202ENST00000359979 DDX11Q96FC9 970 aa26.37■■□□□ 1.81
CCSER2-202ENST00000359979 RCOR1Q9UKL0 485 aa26.36■■□□□ 1.81
CCSER2-202ENST00000359979 STRCP1A6NGW2 1772 aa26.35■■□□□ 1.81
CCSER2-202ENST00000359979 CTAGE5O15320 804 aa26.35■■□□□ 1.81
CCSER2-202ENST00000359979 ADD1P35611 737 aaKnown RBP26.35■■□□□ 1.81
CCSER2-202ENST00000359979 ZNF165P49910 485 aa26.35■■□□□ 1.81
CCSER2-202ENST00000359979 ZNF75DP51815 510 aa26.35■■□□□ 1.81
CCSER2-202ENST00000359979 CWC25Q9NXE8 425 aaPredicted RBP26.35■■□□□ 1.81
CCSER2-202ENST00000359979 GOLIM4O00461 696 aa26.35■■□□□ 1.81
CCSER2-202ENST00000359979 CHAF1AQ13111 956 aaPredicted RBP26.35■■□□□ 1.81
CCSER2-202ENST00000359979 SPEF2Q9C093 1822 aa26.34■■□□□ 1.81
CCSER2-202ENST00000359979 PTGS1P23219 599 aa26.34■■□□□ 1.81
CCSER2-202ENST00000359979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.34■■□□□ 1.81
CCSER2-202ENST00000359979 ATG3Q9NT62 314 aa26.34■■□□□ 1.81
CCSER2-202ENST00000359979 DCCP43146 1447 aa26.34■■□□□ 1.81
CCSER2-202ENST00000359979 NEUROD6Q96NK8 337 aa26.34■■□□□ 1.81
CCSER2-202ENST00000359979 LRRC2Q9BYS8 371 aa26.34■■□□□ 1.81
CCSER2-202ENST00000359979 NBPF26B4DH59 902 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 CIAO1O76071 339 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 CTDNEP1O95476 244 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 ATF3P18847 181 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 NBPF14Q5TI25 921 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 NBPF10Q6P3W6 841 aaKnown RBP26.33■■□□□ 1.81
CCSER2-202ENST00000359979 NBPF15Q8N660 670 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 TRIM5Q9C035 493 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 LAMA4Q16363 1823 aa26.33■■□□□ 1.81
CCSER2-202ENST00000359979 PTPDC1A2A3K4 754 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 CDC25BP30305 580 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 TNS3Q68CZ2 1445 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 FBXL16Q8N461 479 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 ZNF274Q96GC6 653 aaPredicted RBP26.32■■□□□ 1.8
CCSER2-202ENST00000359979 SALL1Q9NSC2 1324 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 CPDO75976 1380 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 EYA2O00167 538 aa26.32■■□□□ 1.8
CCSER2-202ENST00000359979 ZNF396Q96N95 335 aaPredicted RBP26.32■■□□□ 1.8
CCSER2-202ENST00000359979 NUP188Q5SRE5 1749 aa26.31■■□□□ 1.8
CCSER2-202ENST00000359979 RNF113AO15541 343 aaKnown RBP26.31■■□□□ 1.8
CCSER2-202ENST00000359979 HSPD1P10809 573 aaKnown RBP26.31■■□□□ 1.8
CCSER2-202ENST00000359979 CCDC186Q7Z3E2 898 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms