RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
FN1-205ENST00000357867 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
FN1-205ENST00000357867 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
FN1-205ENST00000357867 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 CALM1P0DP23 149 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 CALM2P0DP24 149 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 CALM3P0DP25 149 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
FN1-205ENST00000357867 CALML3P27482 149 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 ARHGAP29Q52LW3 1261 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 CENPHQ9H3R5 247 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 ZBTB43O43298 467 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 PHACTR2O75167 634 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 IMPG2Q9BZV3 1241 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 TTC12Q9H892 705 aaPredicted RBP12.61□□□□□ -0.39
FN1-205ENST00000357867 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
FN1-205ENST00000357867 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
FN1-205ENST00000357867 ERLIN1O75477 346 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 PRAG1Q86YV5 1406 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 MCMDC2Q4G0Z9 681 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 HAND2P61296 217 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 EIF3JO75822 258 aaKnown RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 H0YHG0 523 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 USO1O60763 962 aaKnown RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 RMND1Q9NWS8 449 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 CDC42BPAQ5VT25 1732 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 GOLGA6L7A0A1B0GV03 622 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 TRIM27P14373 513 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 USP8P40818 1118 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
FN1-205ENST00000357867 TAX1BP1Q86VP1 789 aa12.6□□□□□ -0.39
FN1-205ENST00000357867 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 NAPAP54920 295 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 DPP8Q6V1X1 898 aaPredicted RBP12.59□□□□□ -0.39
FN1-205ENST00000357867 CCDC40Q4G0X9 1142 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 PREX2Q70Z35 1606 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 PIK3C2GO75747 1445 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 TTC6Q86TZ1 520 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 PAG1Q9NWQ8 432 aa12.59□□□□□ -0.39
FN1-205ENST00000357867 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
FN1-205ENST00000357867 PRC1O43663 620 aa12.58□□□□□ -0.39
FN1-205ENST00000357867 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.39
FN1-205ENST00000357867 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.39
FN1-205ENST00000357867 CTNNBL1Q8WYA6 563 aaPredicted RBP12.58□□□□□ -0.39
FN1-205ENST00000357867 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.39
FN1-205ENST00000357867 ARHGEF6Q15052 776 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 SLC5A4Q9NY91 659 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 ARHGEF12Q9NZN5 1544 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 UFL1O94874 794 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 STAT6P42226 847 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 CCDC117Q8IWD4 279 aaPredicted RBP12.58□□□□□ -0.4
FN1-205ENST00000357867 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
FN1-205ENST00000357867 GNA11P29992 359 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 IDEP14735 1019 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 RFX1P22670 979 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 EAPPQ56P03 285 aaPredicted RBP12.58□□□□□ -0.4
FN1-205ENST00000357867 PLVAPQ9BX97 442 aa12.58□□□□□ -0.4
FN1-205ENST00000357867 GSTTP1A0A1W2PQM5 241 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 RNMTO43148 476 aaKnown RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 KRT13P13646 458 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 ZNF354CQ86Y25 554 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 KIF22Q14807 665 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 MTERF4Q7Z6M4 381 aaKnown RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 MCM3P25205 808 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 IFI16Q16666 785 aaKnown RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 TCHPQ9BT92 498 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 TRPC5Q9UL62 973 aaPredicted RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 LMAN1P49257 510 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
FN1-205ENST00000357867 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 TDRD12Q587J7 1177 aaKnown RBP12.57□□□□□ -0.4
FN1-205ENST00000357867 MACROD2A1Z1Q3 448 aa12.56□□□□□ -0.4
FN1-205ENST00000357867 ANXA1P04083 346 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms