RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 CCDC114Q96M63 670 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 SMC6Q96SB8 1091 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 CCDC77Q9BR77 488 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 DNAI1Q9UI46 699 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 BAG3O95817 575 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 TAF12Q16514 161 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 TMCO4Q5TGY1 634 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 RMND1Q9NWS8 449 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 TBC1D9Q6ZT07 1266 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 INTS4Q96HW7 963 aaKnown RBP13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 NBPF8Q3BBV2 869 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 ATRIPQ8WXE1 791 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 KRT83P78385 493 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 HMGB2P26583 209 aaKnown RBP13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 EPSTI1Q96J88 318 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 UBASH3AP57075 661 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 SATB1Q01826 763 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 TSPY3P0CV98 308 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 TSPY8P0CW00 308 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
SPTBN1-202ENST00000356805 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 PTPRCP08575 1304 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 KRT86O43790 486 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 CALM1P0DP23 149 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 CALM2P0DP24 149 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 CALM3P0DP25 149 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 VAV2P52735 878 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 RPUSD2Q8IZ73 545 aaKnown RBP13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 MYCBPQ99417 103 aaPredicted RBP13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 LRRC27Q9C0I9 530 aa13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.32
SPTBN1-202ENST00000356805 N4BP3O15049 544 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 GEN1Q17RS7 908 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 CFAP157Q5JU67 520 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 SPATS2Q86XZ4 545 aaKnown RBP13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 LMNTD2Q8IXW0 634 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 PFDN4Q9NQP4 134 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 CRCPO75575 148 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 ATL3Q6DD88 541 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 HEATR3Q7Z4Q2 680 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
SPTBN1-202ENST00000356805 PLCB3Q01970 1234 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 MAK16Q9BXY0 300 aaKnown RBP13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 NCBP1Q09161 790 aaKnown RBP13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 GMNNO75496 209 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 SH2D4BQ5SQS7 431 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 CROCCP2Q86T23 111 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 PPFIBP2Q8ND30 876 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 IL16Q14005 1332 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 AKR1B10O60218 316 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 F8W031 263 aaPredicted RBP13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 HAUS7Q99871 368 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 TACC1O75410 805 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 SAMD15Q9P1V8 674 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 VPS18Q9P253 973 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
SPTBN1-202ENST00000356805 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
SPTBN1-202ENST00000356805 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
SPTBN1-202ENST00000356805 RRAGBQ5VZM2 374 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 USP37Q86T82 979 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 CCDC25Q86WR0 208 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 F6X3S4 739 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 ST5P78524 1137 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 NAA25Q14CX7 972 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
SPTBN1-202ENST00000356805 SPAG5Q96R06 1193 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 RBM27Q9P2N5 1060 aaKnown RBP13□□□□□ -0.33
SPTBN1-202ENST00000356805 GAS8O95995 478 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 MAP2K2P36507 400 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 ANO6Q4KMQ2 910 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
SPTBN1-202ENST00000356805 TCHPQ9BT92 498 aa13□□□□□ -0.33
SPTBN1-202ENST00000356805 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 ATP2A1O14983 1001 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms