RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SPEF2Q9C093 1822 aa30.96■■■□□ 2.55
CLK2-201ENST00000355560 RGL2O15211 777 aa30.95■■■□□ 2.55
CLK2-201ENST00000355560 TTC39AQ5SRH9 613 aa30.95■■■□□ 2.55
CLK2-201ENST00000355560 RASEFQ8IZ41 740 aa30.95■■■□□ 2.55
CLK2-201ENST00000355560 CCDC152Q4G0S7 254 aa30.95■■■□□ 2.54
CLK2-201ENST00000355560 ZNF589Q86UQ0 364 aaPredicted RBP30.95■■■□□ 2.54
CLK2-201ENST00000355560 NARFQ9UHQ1 456 aa30.95■■■□□ 2.54
CLK2-201ENST00000355560 BCL11BQ9C0K0 894 aaPredicted RBP30.94■■■□□ 2.54
CLK2-201ENST00000355560 RTCBQ9Y3I0 505 aaKnown RBP30.94■■■□□ 2.54
CLK2-201ENST00000355560 USPL1Q5W0Q7 1092 aa30.94■■■□□ 2.54
CLK2-201ENST00000355560 BCL2L12Q9HB09 334 aa30.94■■■□□ 2.54
CLK2-201ENST00000355560 EP400Q96L91 3159 aa30.93■■■□□ 2.54
CLK2-201ENST00000355560 MCM2P49736 904 aa30.93■■■□□ 2.54
CLK2-201ENST00000355560 PRPF40BQ6NWY9 871 aaKnown RBP30.93■■■□□ 2.54
CLK2-201ENST00000355560 MAP4K1Q92918 833 aa30.93■■■□□ 2.54
CLK2-201ENST00000355560 SEC31BQ9NQW1 1179 aa30.93■■■□□ 2.54
CLK2-201ENST00000355560 CIZ1Q9ULV3 898 aaPredicted RBP30.93■■■□□ 2.54
CLK2-201ENST00000355560 PDE8BO95263 885 aa30.92■■■□□ 2.54
CLK2-201ENST00000355560 CHGBP05060 677 aa30.92■■■□□ 2.54
CLK2-201ENST00000355560 BICDL1Q6ZP65 573 aa30.92■■■□□ 2.54
CLK2-201ENST00000355560 RBM8AQ9Y5S9 174 aaKnown RBP30.92■■■□□ 2.54
CLK2-201ENST00000355560 C4BP0C0L5 1744 aa30.92■■■□□ 2.54
CLK2-201ENST00000355560 TBC1D9BQ66K14 1250 aa30.92■■■□□ 2.54
CLK2-201ENST00000355560 SRP68Q9UHB9 627 aaKnown RBP30.92■■■□□ 2.54
CLK2-201ENST00000355560 KCNJ4P48050 445 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 MROH5Q6ZUA9 1318 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 RTL9Q8NET4 1388 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 ABCC12Q96J65 1359 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 NECTIN1Q15223 517 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 BRWD3Q6RI45 1802 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 MPHOSPH8Q99549 860 aa30.91■■■□□ 2.54
CLK2-201ENST00000355560 ZPR1O75312 459 aa30.9■■■□□ 2.54
CLK2-201ENST00000355560 AMIGO3Q86WK7 504 aa30.9■■■□□ 2.54
CLK2-201ENST00000355560 FKBP4Q02790 459 aaKnown RBP eCLIP30.89■■■□□ 2.54
CLK2-201ENST00000355560 ERFEQ4G0M1 354 aa30.89■■■□□ 2.54
CLK2-201ENST00000355560 IL27Q8NEV9 243 aa30.88■■■□□ 2.53
CLK2-201ENST00000355560 KCNB2Q92953 911 aa30.88■■■□□ 2.53
CLK2-201ENST00000355560 MCMDC2Q4G0Z9 681 aa30.88■■■□□ 2.53
CLK2-201ENST00000355560 TICAM2Q86XR7 235 aa30.88■■■□□ 2.53
CLK2-201ENST00000355560 TMX3Q96JJ7 454 aa30.88■■■□□ 2.53
CLK2-201ENST00000355560 SEC62Q99442 399 aaKnown RBP30.88■■■□□ 2.53
CLK2-201ENST00000355560 C4AP0C0L4 1744 aa30.87■■■□□ 2.53
CLK2-201ENST00000355560 TAF5LO75529 589 aa30.87■■■□□ 2.53
CLK2-201ENST00000355560 SCARF1Q14162 830 aa30.87■■■□□ 2.53
CLK2-201ENST00000355560 PUM3Q15397 648 aaKnown RBP30.87■■■□□ 2.53
CLK2-201ENST00000355560 CREB3L3Q68CJ9 461 aa30.87■■■□□ 2.53
CLK2-201ENST00000355560 KRT27Q7Z3Y8 459 aa30.87■■■□□ 2.53
CLK2-201ENST00000355560 ARHGEF1Q92888 912 aaKnown RBP30.87■■■□□ 2.53
CLK2-201ENST00000355560 ZKSCAN1P17029 563 aaPredicted RBP30.86■■■□□ 2.53
CLK2-201ENST00000355560 IGHMBP2P38935 993 aaKnown RBP30.86■■■□□ 2.53
CLK2-201ENST00000355560 FAM196AQ6ZSG2 479 aa30.86■■■□□ 2.53
CLK2-201ENST00000355560 NOL8Q76FK4 1167 aaKnown RBP30.86■■■□□ 2.53
CLK2-201ENST00000355560 HELBQ8NG08 1087 aaPredicted RBP30.86■■■□□ 2.53
CLK2-201ENST00000355560 COL24A1Q17RW2 1714 aa30.86■■■□□ 2.53
CLK2-201ENST00000355560 CASZ1Q86V15 1759 aa30.86■■■□□ 2.53
CLK2-201ENST00000355560 CCDC129Q6ZRS4 1044 aa30.85■■■□□ 2.53
CLK2-201ENST00000355560 SETDB2Q96T68 719 aa30.85■■■□□ 2.53
CLK2-201ENST00000355560 ARAP2Q8WZ64 1704 aa30.85■■■□□ 2.53
CLK2-201ENST00000355560 CASTP20810 708 aaKnown RBP30.85■■■□□ 2.53
CLK2-201ENST00000355560 GTF2E1P29083 439 aaPredicted RBP30.85■■■□□ 2.53
CLK2-201ENST00000355560 LRRC4BQ9NT99 713 aa30.85■■■□□ 2.53
CLK2-201ENST00000355560 PHF14O94880 888 aa30.84■■■□□ 2.53
CLK2-201ENST00000355560 LPIN2Q92539 896 aa30.84■■■□□ 2.53
CLK2-201ENST00000355560 SLC27A2O14975 620 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 ADCK5Q3MIX3 580 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 SLFNL1Q499Z3 407 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 JAKMIP1Q96N16 626 aaKnown RBP30.83■■■□□ 2.53
CLK2-201ENST00000355560 FGFR2P21802 821 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 ZAP70P43403 619 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 RNF20Q5VTR2 975 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 PI16Q6UXB8 463 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 C3orf67Q6ZVT6 689 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 NYXQ9GZU5 481 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 HELLSQ9NRZ9 838 aa30.83■■■□□ 2.53
CLK2-201ENST00000355560 AKAP11Q9UKA4 1901 aa30.82■■■□□ 2.52
CLK2-201ENST00000355560 RAB3GAP1Q15042 981 aa30.82■■■□□ 2.52
CLK2-201ENST00000355560 ZGPATQ8N5A5 531 aaKnown RBP30.82■■■□□ 2.52
CLK2-201ENST00000355560 TTC14Q96N46 770 aa30.82■■■□□ 2.52
CLK2-201ENST00000355560 CDC5LQ99459 802 aaKnown RBP30.82■■■□□ 2.52
CLK2-201ENST00000355560 COL4A1P02462 1669 aa30.82■■■□□ 2.52
CLK2-201ENST00000355560 MCAMP43121 646 aa30.82■■■□□ 2.52
CLK2-201ENST00000355560 ZMYM1Q5SVZ6 1142 aa30.82■■■□□ 2.52
CLK2-201ENST00000355560 ZNF512BQ96KM6 892 aaPredicted RBP30.82■■■□□ 2.52
CLK2-201ENST00000355560 RNF113AO15541 343 aaKnown RBP30.81■■■□□ 2.52
CLK2-201ENST00000355560 RFC4P35249 363 aa30.81■■■□□ 2.52
CLK2-201ENST00000355560 SF3B3Q15393 1217 aaKnown RBP30.81■■■□□ 2.52
CLK2-201ENST00000355560 TRAPPC3LQ5T215 181 aa30.81■■■□□ 2.52
CLK2-201ENST00000355560 TM6SF1Q9BZW5 370 aa30.81■■■□□ 2.52
CLK2-201ENST00000355560 NBPF5PQ86XG9 351 aaPredicted RBP30.8■■■□□ 2.52
CLK2-201ENST00000355560 SSFA2P28290 1259 aa30.8■■■□□ 2.52
CLK2-201ENST00000355560 LRRFIP1Q32MZ4 808 aaKnown RBP30.8■■■□□ 2.52
CLK2-201ENST00000355560 CCDC102BQ68D86 513 aa30.8■■■□□ 2.52
CLK2-201ENST00000355560 CWC22Q9HCG8 908 aaKnown RBP30.8■■■□□ 2.52
CLK2-201ENST00000355560 TRIM37O94972 964 aa30.79■■■□□ 2.52
CLK2-201ENST00000355560 SLC5A1P13866 664 aa30.79■■■□□ 2.52
CLK2-201ENST00000355560 CPA1P15085 419 aa30.79■■■□□ 2.52
CLK2-201ENST00000355560 PHKA1P46020 1223 aa30.79■■■□□ 2.52
CLK2-201ENST00000355560 SLC10A5Q5PT55 438 aa30.79■■■□□ 2.52
CLK2-201ENST00000355560 ZSWIM6Q9HCJ5 1215 aa30.79■■■□□ 2.52
CLK2-201ENST00000355560 HMG20BQ9P0W2 317 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms