RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 SFPQP23246 707 aaKnown RBP eCLIP22.64■■□□□ 1.21
PTPA-204ENST00000355007 TPM4P67936 248 aa22.64■■□□□ 1.21
PTPA-204ENST00000355007 TMCO3Q6UWJ1 677 aa22.64■■□□□ 1.21
PTPA-204ENST00000355007 LLPHQ9BRT6 129 aaKnown RBP22.64■■□□□ 1.21
PTPA-204ENST00000355007 PHLPP2Q6ZVD8 1323 aa22.63■■□□□ 1.21
PTPA-204ENST00000355007 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
PTPA-204ENST00000355007 NRDCO43847 1150 aa22.63■■□□□ 1.21
PTPA-204ENST00000355007 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
PTPA-204ENST00000355007 EAF2Q96CJ1 260 aaPredicted RBP22.63■■□□□ 1.21
PTPA-204ENST00000355007 NEK1Q96PY6 1258 aa22.63■■□□□ 1.21
PTPA-204ENST00000355007 ORC3Q9UBD5 711 aaPredicted RBP22.63■■□□□ 1.21
PTPA-204ENST00000355007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.63■■□□□ 1.21
PTPA-204ENST00000355007 TAF5LO75529 589 aa22.63■■□□□ 1.21
PTPA-204ENST00000355007 FTOQ9C0B1 505 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPA-204ENST00000355007 EIF4A1P60842 406 aaKnown RBP22.62■■□□□ 1.21
PTPA-204ENST00000355007 UBXN4Q92575 508 aa22.62■■□□□ 1.21
PTPA-204ENST00000355007 BPIFA3Q9BQP9 254 aa22.62■■□□□ 1.21
PTPA-204ENST00000355007 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
PTPA-204ENST00000355007 ETF1P62495 437 aaKnown RBP22.62■■□□□ 1.21
PTPA-204ENST00000355007 Q6ZUG5 572 aa22.62■■□□□ 1.21
PTPA-204ENST00000355007 FSIP1Q8NA03 581 aa22.62■■□□□ 1.21
PTPA-204ENST00000355007 USP28Q96RU2 1077 aa22.62■■□□□ 1.21
PTPA-204ENST00000355007 XPO4Q9C0E2 1151 aaKnown RBP22.62■■□□□ 1.21
PTPA-204ENST00000355007 ATP8B1O43520 1251 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 ALDH1L1O75891 902 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 SASH1O94885 1247 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 HSP90B1P14625 803 aaKnown RBP22.61■■□□□ 1.21
PTPA-204ENST00000355007 TMC6Q7Z403 805 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 ZNF396Q96N95 335 aaPredicted RBP22.61■■□□□ 1.21
PTPA-204ENST00000355007 CCP110O43303 1012 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 SCRN1Q12765 414 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 TXLNBQ8N3L3 684 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 SRRTQ9BXP5 876 aaKnown RBP22.61■■□□□ 1.21
PTPA-204ENST00000355007 BOLA2Q9H3K6 86 aa22.61■■□□□ 1.21
PTPA-204ENST00000355007 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
PTPA-204ENST00000355007 RAD51AP2Q09MP3 1159 aa22.6■■□□□ 1.21
PTPA-204ENST00000355007 CCDC8Q9H0W5 538 aaPredicted RBP22.6■■□□□ 1.21
PTPA-204ENST00000355007 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
PTPA-204ENST00000355007 MED1Q15648 1581 aaPredicted RBP22.6■■□□□ 1.21
PTPA-204ENST00000355007 SMC2O95347 1197 aa22.6■■□□□ 1.21
PTPA-204ENST00000355007 MUM1L1Q5H9M0 696 aa22.6■■□□□ 1.21
PTPA-204ENST00000355007 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
PTPA-204ENST00000355007 UBXN6Q9BZV1 441 aa22.6■■□□□ 1.21
PTPA-204ENST00000355007 IFNKQ9P0W0 207 aa22.6■■□□□ 1.21
PTPA-204ENST00000355007 FMR1NBQ8N0W7 255 aaPredicted RBP22.59■■□□□ 1.21
PTPA-204ENST00000355007 FEZ2Q9UHY8 353 aaPredicted RBP22.59■■□□□ 1.21
PTPA-204ENST00000355007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.59■■□□□ 1.21
PTPA-204ENST00000355007 KDM3BQ7LBC6 1761 aa22.59■■□□□ 1.21
PTPA-204ENST00000355007 HOMER1Q86YM7 354 aa22.59■■□□□ 1.21
PTPA-204ENST00000355007 NSUN7Q8NE18 718 aaKnown RBP22.59■■□□□ 1.21
PTPA-204ENST00000355007 TLR7Q9NYK1 1049 aaKnown RBP22.59■■□□□ 1.21
PTPA-204ENST00000355007 ABCC6O95255 1503 aa22.58■■□□□ 1.21
PTPA-204ENST00000355007 PFKFB2O60825 505 aa22.58■■□□□ 1.21
PTPA-204ENST00000355007 ME1P48163 572 aa22.58■■□□□ 1.21
PTPA-204ENST00000355007 TADA3O75528 432 aa22.58■■□□□ 1.2
PTPA-204ENST00000355007 TPM1P09493 284 aa22.58■■□□□ 1.2
PTPA-204ENST00000355007 G3BP1Q13283 466 aaKnown RBP eCLIP22.58■■□□□ 1.22e-6■■■■□ 24.8
PTPA-204ENST00000355007 MRPS27Q92552 414 aaKnown RBP22.58■■□□□ 1.2
PTPA-204ENST00000355007 ERCC4Q92889 916 aaPredicted RBP22.58■■□□□ 1.2
PTPA-204ENST00000355007 DNAI1Q9UI46 699 aa22.57■■□□□ 1.2
PTPA-204ENST00000355007 EFCAB8A8MWE9 144 aa22.57■■□□□ 1.2
PTPA-204ENST00000355007 DPCR1Q3MIW9 517 aa22.57■■□□□ 1.2
PTPA-204ENST00000355007 MNS1Q8NEH6 495 aa22.57■■□□□ 1.2
PTPA-204ENST00000355007 FBXW7Q969H0 707 aa22.57■■□□□ 1.2
PTPA-204ENST00000355007 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
PTPA-204ENST00000355007 ANXA1P04083 346 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 CCDC158Q5M9N0 1113 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 GORABQ5T7V8 394 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 AGLP35573 1532 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 COL15A1P39059 1388 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 POLR3GO15318 223 aaPredicted RBP22.56■■□□□ 1.2
PTPA-204ENST00000355007 HDGFP51858 240 aaKnown RBP22.56■■□□□ 1.2
PTPA-204ENST00000355007 NEK11Q8NG66 645 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 TRERF1Q96PN7 1200 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 KIAA1468Q9P260 1216 aa22.56■■□□□ 1.2
PTPA-204ENST00000355007 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 NCAPD2Q15021 1401 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 HOXC9P31274 260 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 ZRSR1Q15695 479 aaKnown RBP22.55■■□□□ 1.2
PTPA-204ENST00000355007 TRIM34Q9BYJ4 488 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 MAP3K2Q9Y2U5 619 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 U3KPZ7 1027 aaPredicted RBP22.55■■□□□ 1.2
PTPA-204ENST00000355007 PTPDC1A2A3K4 754 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 TRIM65Q6PJ69 517 aa22.55■■□□□ 1.2
PTPA-204ENST00000355007 A0A1W2PQ27 194 aa22.54■■□□□ 1.2
PTPA-204ENST00000355007 A0A1W2PQ64 194 aa22.54■■□□□ 1.2
PTPA-204ENST00000355007 A0A1W2PQD8 194 aa22.54■■□□□ 1.2
PTPA-204ENST00000355007 LRRFIP1Q32MZ4 808 aaKnown RBP22.54■■□□□ 1.2
PTPA-204ENST00000355007 PCDHA7Q9UN72 937 aa22.54■■□□□ 1.2
PTPA-204ENST00000355007 CTDNEP1O95476 244 aa22.54■■□□□ 1.2
PTPA-204ENST00000355007 ADALQ6DHV7 355 aa22.54■■□□□ 1.2
PTPA-204ENST00000355007 DIP2AQ14689 1571 aa22.53■■□□□ 1.2
PTPA-204ENST00000355007 MRC1P22897 1456 aa22.53■■□□□ 1.2
PTPA-204ENST00000355007 GPS2Q13227 327 aa22.53■■□□□ 1.2
PTPA-204ENST00000355007 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
PTPA-204ENST00000355007 SEC31AO94979 1220 aaKnown RBP22.53■■□□□ 1.2
PTPA-204ENST00000355007 CYP21A2P08686 494 aa22.53■■□□□ 1.2
PTPA-204ENST00000355007 FOSBP53539 338 aa22.53■■□□□ 1.2
PTPA-204ENST00000355007 ILDR1Q86SU0 546 aaPredicted RBP22.53■■□□□ 1.2
PTPA-204ENST00000355007 SLIT1O75093 1534 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms