RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CCDC25Q86WR0 208 aa15.31■□□□□ 0.04
LMBR1-201ENST00000353442 FANCIQ9NVI1 1328 aa15.31■□□□□ 0.04
LMBR1-201ENST00000353442 HYPKQ9NX55 129 aa15.31■□□□□ 0.04
LMBR1-201ENST00000353442 AFG3L2Q9Y4W6 797 aa15.31■□□□□ 0.04
LMBR1-201ENST00000353442 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
LMBR1-201ENST00000353442 MYOM3Q5VTT5 1437 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 AKR1B10O60218 316 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 CFAP157Q5JU67 520 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 MYCLP12524 364 aaPredicted RBP15.3■□□□□ 0.04
LMBR1-201ENST00000353442 AAMPQ13685 434 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 RPUSD2Q8IZ73 545 aaKnown RBP15.3■□□□□ 0.04
LMBR1-201ENST00000353442 HELBQ8NG08 1087 aaPredicted RBP15.3■□□□□ 0.04
LMBR1-201ENST00000353442 SPECC1LQ69YQ0 1117 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 DAAM2Q86T65 1068 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 PPP1R9BQ96SB3 815 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 ANKRD24Q8TF21 1146 aa15.3■□□□□ 0.04
LMBR1-201ENST00000353442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 ASIC1P78348 528 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 C4orf50Q6ZRC1 276 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 GPATCH11Q8N954 259 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 EPSTI1Q96J88 318 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 PPANQ9NQ55 473 aaKnown RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.045e-8■■■■□ 25.7
LMBR1-201ENST00000353442 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 CCDC89Q8N998 374 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 TTC12Q9H892 705 aaPredicted RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 N4BP3O15049 544 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 KIF4AO95239 1232 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 HMGB1P09429 215 aaKnown RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 SMARCC1Q92922 1105 aaPredicted RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 PPME1Q9Y570 386 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 GJB2P29033 226 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 IFRD2Q12894 506 aaPredicted RBP15.29■□□□□ 0.04
LMBR1-201ENST00000353442 BIRC3Q13489 604 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 NCOA7Q8NI08 942 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 AGTPBP1Q9UPW5 1226 aa15.29■□□□□ 0.04
LMBR1-201ENST00000353442 DDB1Q16531 1140 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 GSDMBQ8TAX9 411 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 GMNNO75496 209 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 CCDC169A6NNP5 214 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
LMBR1-201ENST00000353442 E7EVH7 732 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 HSF2BPO75031 334 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 MCM3P25205 808 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 DCAF17Q5H9S7 520 aaPredicted RBP15.28■□□□□ 0.04
LMBR1-201ENST00000353442 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 GOLGA1Q92805 767 aa15.28■□□□□ 0.04
LMBR1-201ENST00000353442 PTPDC1A2A3K4 754 aa15.27■□□□□ 0.04
LMBR1-201ENST00000353442 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
LMBR1-201ENST00000353442 LRRC27Q9C0I9 530 aa15.27■□□□□ 0.04
LMBR1-201ENST00000353442 EMILIN1Q9Y6C2 1016 aa15.27■□□□□ 0.04
LMBR1-201ENST00000353442 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.03
LMBR1-201ENST00000353442 FCHSD1Q86WN1 690 aa15.27■□□□□ 0.03
LMBR1-201ENST00000353442 C16orf45Q96MC5 204 aaPredicted RBP15.27■□□□□ 0.03
LMBR1-201ENST00000353442 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.03
LMBR1-201ENST00000353442 BRDTQ58F21 947 aaPredicted RBP15.27■□□□□ 0.03
LMBR1-201ENST00000353442 MICALCLQ6ZW33 695 aa15.27■□□□□ 0.03
LMBR1-201ENST00000353442 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.03
LMBR1-201ENST00000353442 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.03
LMBR1-201ENST00000353442 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 TTC30AQ86WT1 665 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 IRAK4Q9NWZ3 460 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 RPAP2Q8IXW5 612 aaPredicted RBP15.26■□□□□ 0.03
LMBR1-201ENST00000353442 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
LMBR1-201ENST00000353442 TSTA3Q13630 321 aaPredicted RBP15.26■□□□□ 0.03
LMBR1-201ENST00000353442 ZGPATQ8N5A5 531 aaKnown RBP15.26■□□□□ 0.03
LMBR1-201ENST00000353442 KIF18AQ8NI77 898 aa15.26■□□□□ 0.03
LMBR1-201ENST00000353442 RRP36Q96EU6 259 aaKnown RBP15.26■□□□□ 0.03
LMBR1-201ENST00000353442 PSMD6Q15008 389 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 CCDC24Q8N4L8 307 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 RSPH3Q86UC2 560 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 RAPGEF1Q13905 1077 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 ZCRB1Q8TBF4 217 aaKnown RBP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 SMC6Q96SB8 1091 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 CACYBPQ9HB71 228 aaKnown RBP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 KCNK9Q9NPC2 374 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 DBF4Q9UBU7 674 aaPredicted RBP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 M0QZ92 97 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
LMBR1-201ENST00000353442 TTC30BQ8N4P2 665 aa15.25■□□□□ 0.03
LMBR1-201ENST00000353442 RASAL2Q9UJF2 1139 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms