RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
SEC13-202ENST00000350697 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
SEC13-202ENST00000350697 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
SEC13-202ENST00000350697 MINPP1Q9UNW1 487 aa17.4■□□□□ 0.38
SEC13-202ENST00000350697 CCDC88AQ3V6T2 1871 aa17.39■□□□□ 0.38
SEC13-202ENST00000350697 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.38
SEC13-202ENST00000350697 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.38
SEC13-202ENST00000350697 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.38
SEC13-202ENST00000350697 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.38
SEC13-202ENST00000350697 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.38
SEC13-202ENST00000350697 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.38
SEC13-202ENST00000350697 XDHP47989 1333 aa17.39■□□□□ 0.37
SEC13-202ENST00000350697 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 PRELPP51888 382 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 ANKRD2Q9GZV1 360 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
SEC13-202ENST00000350697 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 DUOX1Q9NRD9 1551 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
SEC13-202ENST00000350697 CHRNDQ07001 517 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
SEC13-202ENST00000350697 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
SEC13-202ENST00000350697 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
SEC13-202ENST00000350697 TBC1D16Q8TBP0 767 aa17.37■□□□□ 0.37
SEC13-202ENST00000350697 PUS3Q9BZE2 481 aaKnown RBP17.37■□□□□ 0.37
SEC13-202ENST00000350697 POLLQ9UGP5 575 aa17.37■□□□□ 0.37
SEC13-202ENST00000350697 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
SEC13-202ENST00000350697 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
SEC13-202ENST00000350697 PNMA6EA0A0J9YXQ4 647 aa17.36■□□□□ 0.37
SEC13-202ENST00000350697 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
SEC13-202ENST00000350697 UFL1O94874 794 aa17.36■□□□□ 0.37
SEC13-202ENST00000350697 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
SEC13-202ENST00000350697 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
SEC13-202ENST00000350697 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
SEC13-202ENST00000350697 EYA2O00167 538 aa17.35■□□□□ 0.37
SEC13-202ENST00000350697 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
SEC13-202ENST00000350697 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
SEC13-202ENST00000350697 EYA3Q99504 573 aa17.35■□□□□ 0.37
SEC13-202ENST00000350697 LEMD3Q9Y2U8 911 aa17.35■□□□□ 0.37
SEC13-202ENST00000350697 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
SEC13-202ENST00000350697 PPIP5K2O43314 1243 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 CIAO1O76071 339 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 POLA2Q14181 598 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 AOC3Q16853 763 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
SEC13-202ENST00000350697 ZC3H4Q9UPT8 1303 aaKnown RBP17.34■□□□□ 0.37
SEC13-202ENST00000350697 PA2G4Q9UQ80 394 aaKnown RBP17.34■□□□□ 0.37
SEC13-202ENST00000350697 A0A1B0GUL6 1792 aa17.33■□□□□ 0.37
SEC13-202ENST00000350697 RPAP2Q8IXW5 612 aaPredicted RBP17.33■□□□□ 0.36
SEC13-202ENST00000350697 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.36
SEC13-202ENST00000350697 JDP2Q8WYK2 163 aa17.33■□□□□ 0.36
SEC13-202ENST00000350697 CRBNQ96SW2 442 aa17.33■□□□□ 0.36
SEC13-202ENST00000350697 SIL1Q9H173 461 aa17.33■□□□□ 0.36
SEC13-202ENST00000350697 ZNF804BA4D1E1 1349 aa17.32■□□□□ 0.36
SEC13-202ENST00000350697 TAF5LO75529 589 aa17.32■□□□□ 0.36
SEC13-202ENST00000350697 KCNJ4P48050 445 aa17.32■□□□□ 0.36
SEC13-202ENST00000350697 METTL24Q5JXM2 366 aa17.32■□□□□ 0.36
SEC13-202ENST00000350697 ATG9AQ7Z3C6 839 aa17.32■□□□□ 0.36
SEC13-202ENST00000350697 TIAM2Q8IVF5 1701 aa17.31■□□□□ 0.36
SEC13-202ENST00000350697 RIMBP2O15034 1052 aa17.31■□□□□ 0.36
SEC13-202ENST00000350697 IL15P40933 162 aaPredicted RBP17.31■□□□□ 0.36
SEC13-202ENST00000350697 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
SEC13-202ENST00000350697 ZC3H12CQ9C0D7 883 aaKnown RBP17.31■□□□□ 0.36
SEC13-202ENST00000350697 MED23Q9ULK4 1368 aa17.31■□□□□ 0.36
SEC13-202ENST00000350697 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
SEC13-202ENST00000350697 HMMRO75330 724 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 COL4A5P29400 1685 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 PDE8BO95263 885 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.362e-9■■■□□ 17.5
SEC13-202ENST00000350697 UBE4AQ14139 1066 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 VGLL2Q8N8G2 317 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 CEP126Q9P2H0 1117 aa17.3■□□□□ 0.36
SEC13-202ENST00000350697 FZD9O00144 591 aa17.29■□□□□ 0.36
SEC13-202ENST00000350697 SNAP23O00161 211 aa17.29■□□□□ 0.36
SEC13-202ENST00000350697 AAMPQ13685 434 aa17.29■□□□□ 0.36
SEC13-202ENST00000350697 G3V3G9 751 aa17.28■□□□□ 0.36
SEC13-202ENST00000350697 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
SEC13-202ENST00000350697 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
SEC13-202ENST00000350697 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
SEC13-202ENST00000350697 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
SEC13-202ENST00000350697 ZNRF3Q9ULT6 936 aa17.28■□□□□ 0.36
SEC13-202ENST00000350697 NOP58Q9Y2X3 529 aaKnown RBP17.28■□□□□ 0.36
SEC13-202ENST00000350697 PUM3Q15397 648 aaKnown RBP17.27■□□□□ 0.35
SEC13-202ENST00000350697 TXNRD3Q86VQ6 643 aa17.27■□□□□ 0.35
SEC13-202ENST00000350697 IRS2Q9Y4H2 1338 aa17.26■□□□□ 0.35
SEC13-202ENST00000350697 ECE2O60344 883 aa17.26■□□□□ 0.35
SEC13-202ENST00000350697 KLRK1P26718 216 aa17.26■□□□□ 0.35
SEC13-202ENST00000350697 EIF6P56537 245 aaKnown RBP17.26■□□□□ 0.35
SEC13-202ENST00000350697 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
SEC13-202ENST00000350697 DOK7Q18PE1 504 aa17.26■□□□□ 0.35
SEC13-202ENST00000350697 DPY19L2Q6NUT2 758 aa17.26■□□□□ 0.35
SEC13-202ENST00000350697 DBNDD1Q9H9R9 158 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms