RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 UBN2Q6ZU65 1347 aa23.42■■□□□ 1.34
PUF60-202ENST00000349157 SSFA2P28290 1259 aa23.41■■□□□ 1.34
PUF60-202ENST00000349157 ANKRD1Q15327 319 aa23.41■■□□□ 1.34
PUF60-202ENST00000349157 CREB3L3Q68CJ9 461 aa23.41■■□□□ 1.34
PUF60-202ENST00000349157 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
PUF60-202ENST00000349157 SH2B1Q9NRF2 756 aaPredicted RBP23.41■■□□□ 1.34
PUF60-202ENST00000349157 LIMCH1Q9UPQ0 1083 aa23.41■■□□□ 1.34
PUF60-202ENST00000349157 MROH5Q6ZUA9 1318 aa23.41■■□□□ 1.34
PUF60-202ENST00000349157 METTL24Q5JXM2 366 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 PUS3Q9BZE2 481 aaKnown RBP23.4■■□□□ 1.34
PUF60-202ENST00000349157 TAF5LO75529 589 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 TTC39AQ5SRH9 613 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 RASEFQ8IZ41 740 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 CERKQ8TCT0 537 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 UPF3BQ9BZI7 483 aaKnown RBP23.4■■□□□ 1.34
PUF60-202ENST00000349157 CNNM1Q9NRU3 951 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 FOXD4L1Q9NU39 408 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 LRP5O75197 1615 aa23.4■■□□□ 1.34
PUF60-202ENST00000349157 ATP2B3Q16720 1220 aa23.39■■□□□ 1.33
PUF60-202ENST00000349157 XAGE2Q96GT9 111 aa23.39■■□□□ 1.33
PUF60-202ENST00000349157 GREM2Q9H772 168 aa23.39■■□□□ 1.33
PUF60-202ENST00000349157 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.39■■□□□ 1.33
PUF60-202ENST00000349157 BCORQ6W2J9 1755 aa23.39■■□□□ 1.33
PUF60-202ENST00000349157 CASTP20810 708 aaKnown RBP23.38■■□□□ 1.33
PUF60-202ENST00000349157 CCDC152Q4G0S7 254 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 RUFY3Q7L099 469 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 LAMB2P55268 1798 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
PUF60-202ENST00000349157 NHSQ6T4R5 1651 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 SLC27A2O14975 620 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 JAKMIP1Q96N16 626 aaKnown RBP23.38■■□□□ 1.33
PUF60-202ENST00000349157 DSCC1Q9BVC3 393 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 PDRG1Q9NUG6 133 aa23.38■■□□□ 1.33
PUF60-202ENST00000349157 RIC1Q4ADV7 1423 aa23.37■■□□□ 1.33
PUF60-202ENST00000349157 HMGB2P26583 209 aaKnown RBP23.37■■□□□ 1.33
PUF60-202ENST00000349157 ZMYM1Q5SVZ6 1142 aa23.37■■□□□ 1.33
PUF60-202ENST00000349157 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
PUF60-202ENST00000349157 GOLIM4O00461 696 aa23.36■■□□□ 1.33
PUF60-202ENST00000349157 RNF113AO15541 343 aaKnown RBP23.36■■□□□ 1.33
PUF60-202ENST00000349157 PDE8BO95263 885 aa23.36■■□□□ 1.33
PUF60-202ENST00000349157 TTF1Q15361 905 aaPredicted RBP23.36■■□□□ 1.33
PUF60-202ENST00000349157 ZSCAN25Q6NSZ9 544 aa23.36■■□□□ 1.33
PUF60-202ENST00000349157 KCNQ2O43526 872 aa23.36■■□□□ 1.33
PUF60-202ENST00000349157 UQCRFS1P1P0C7P4 283 aa23.36■■□□□ 1.33
PUF60-202ENST00000349157 DDX46Q7L014 1031 aaKnown RBP23.36■■□□□ 1.33
PUF60-202ENST00000349157 MYH14Q7Z406 1995 aaKnown RBP23.35■■□□□ 1.33
PUF60-202ENST00000349157 TRAK2O60296 914 aa23.35■■□□□ 1.33
PUF60-202ENST00000349157 ONECUT3O60422 494 aaPredicted RBP23.35■■□□□ 1.33
PUF60-202ENST00000349157 AK2P54819 239 aa23.35■■□□□ 1.33
PUF60-202ENST00000349157 NIP7Q9Y221 180 aaKnown RBP eCLIP23.35■■□□□ 1.33
PUF60-202ENST00000349157 HMGB1P09429 215 aaKnown RBP23.34■■□□□ 1.33
PUF60-202ENST00000349157 MEX3CQ5U5Q3 659 aaKnown RBP23.34■■□□□ 1.33
PUF60-202ENST00000349157 VGLL2Q8N8G2 317 aa23.34■■□□□ 1.33
PUF60-202ENST00000349157 GJD4Q96KN9 370 aaPredicted RBP23.34■■□□□ 1.33
PUF60-202ENST00000349157 NTSR2O95665 410 aa23.33■■□□□ 1.33
PUF60-202ENST00000349157 PUM3Q15397 648 aaKnown RBP23.33■■□□□ 1.33
PUF60-202ENST00000349157 BLOC1S2Q6QNY1 142 aa23.33■■□□□ 1.33
PUF60-202ENST00000349157 ZGPATQ8N5A5 531 aaKnown RBP23.33■■□□□ 1.33
PUF60-202ENST00000349157 LPIN2Q92539 896 aa23.33■■□□□ 1.33
PUF60-202ENST00000349157 EDC3Q96F86 508 aaKnown RBP23.33■■□□□ 1.33
PUF60-202ENST00000349157 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.33■■□□□ 1.338e-8■■■■□ 25
PUF60-202ENST00000349157 ZNF589Q86UQ0 364 aaPredicted RBP23.33■■□□□ 1.32
PUF60-202ENST00000349157 ISY1Q9ULR0 285 aaKnown RBP23.33■■□□□ 1.32
PUF60-202ENST00000349157 BAG4O95429 457 aaKnown RBP23.32■■□□□ 1.32
PUF60-202ENST00000349157 IGHMBP2P38935 993 aaKnown RBP23.32■■□□□ 1.32
PUF60-202ENST00000349157 MPHOSPH8Q99549 860 aa23.32■■□□□ 1.32
PUF60-202ENST00000349157 TRPC5Q9UL62 973 aaPredicted RBP23.32■■□□□ 1.32
PUF60-202ENST00000349157 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
PUF60-202ENST00000349157 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
PUF60-202ENST00000349157 LINC00116Q8NCU8 138 aa23.31■■□□□ 1.32
PUF60-202ENST00000349157 SLC5A1P13866 664 aa23.31■■□□□ 1.32
PUF60-202ENST00000349157 CCDC85AQ96PX6 553 aaPredicted RBP23.31■■□□□ 1.32
PUF60-202ENST00000349157 CDC5LQ99459 802 aaKnown RBP23.31■■□□□ 1.32
PUF60-202ENST00000349157 NYXQ9GZU5 481 aa23.31■■□□□ 1.32
PUF60-202ENST00000349157 ATRNO75882 1429 aa23.3■■□□□ 1.32
PUF60-202ENST00000349157 WDR33Q9C0J8 1336 aaKnown RBP23.3■■□□□ 1.32
PUF60-202ENST00000349157 BRD1O95696 1058 aa23.3■■□□□ 1.32
PUF60-202ENST00000349157 CHMP4CQ96CF2 233 aa23.3■■□□□ 1.32
PUF60-202ENST00000349157 CTNNA3Q9UI47 895 aa23.3■■□□□ 1.32
PUF60-202ENST00000349157 ARAP2Q8WZ64 1704 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 SCN7AQ01118 1682 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 RPS6KB1P23443 525 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 BTAF1O14981 1849 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 FGFR2P21802 821 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 ARID4AP29374 1257 aaPredicted RBP23.29■■□□□ 1.32
PUF60-202ENST00000349157 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.324e-12■■■■□ 23.5
PUF60-202ENST00000349157 ADCK5Q3MIX3 580 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 NARFQ9UHQ1 456 aa23.29■■□□□ 1.32
PUF60-202ENST00000349157 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
PUF60-202ENST00000349157 ADORA1P30542 326 aa23.28■■□□□ 1.32
PUF60-202ENST00000349157 APPBP2Q92624 585 aa23.28■■□□□ 1.32
PUF60-202ENST00000349157 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.32
PUF60-202ENST00000349157 SLC10A5Q5PT55 438 aa23.27■■□□□ 1.32
PUF60-202ENST00000349157 NEK1Q96PY6 1258 aa23.27■■□□□ 1.32
PUF60-202ENST00000349157 HCLS1P14317 486 aaPredicted RBP23.26■■□□□ 1.31
PUF60-202ENST00000349157 L1TD1Q5T7N2 865 aaKnown RBP23.26■■□□□ 1.31
PUF60-202ENST00000349157 SMC3Q9UQE7 1217 aa23.26■■□□□ 1.31
PUF60-202ENST00000349157 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
PUF60-202ENST00000349157 ATP6V1DQ9Y5K8 247 aa23.25■■□□□ 1.31
PUF60-202ENST00000349157 NDUFB9Q9Y6M9 179 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms