RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 GDAP1L1Q96MZ0 367 aa14.39□□□□□ -0.11
SSX2IP-201ENST00000342203 FKBP15Q5T1M5 1219 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 TTC41PQ6P2S7 1318 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 EPS15P42566 896 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 TDO2P48775 406 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 ACEP12821 1306 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 GOLGA8AA7E2F4 631 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 HNRNPH2P55795 449 aaKnown RBP14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 STIM1Q13586 685 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
SSX2IP-201ENST00000342203 SLC26A6Q9BXS9 759 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 RGS12O14924 1447 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 MYL5Q02045 173 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 GUCA1BQ9UMX6 200 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 CTAGE9A4FU28 777 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 CYP2E1P05181 493 aaPredicted RBP14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 MCMDC2Q4G0Z9 681 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 IQCEQ6IPM2 695 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 DDX41Q9UJV9 622 aaKnown RBP14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 SHANK2Q9UPX8 1470 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 ETF1P62495 437 aaKnown RBP14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 YEATS4O95619 227 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 TICAM2Q86XR7 235 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 UBAC1Q9BSL1 405 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 FTOQ9C0B1 505 aaKnown RBP eCLIP14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
SSX2IP-201ENST00000342203 C11orf57Q6ZUT1 292 aaPredicted RBP14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 DUOX2Q9NRD8 1548 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 IFIT3O14879 490 aaKnown RBP14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 GOLGA8FQ08AF8 430 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 GOLGA8DPQ0D2H9 430 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 DESI2Q9BSY9 194 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 PRDM4Q9UKN5 801 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 A0A1B0GUL7 405 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 EBAG9O00559 213 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 ZEB2O60315 1214 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 METAP2P50579 478 aaKnown RBP eCLIP14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 SPA17Q15506 151 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 SPECC1Q5M775 1068 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 NBPF11Q86T75 865 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 RBM33Q96EV2 1170 aaKnown RBP14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 GRM8O00222 908 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 DHX32Q7L7V1 743 aaKnown RBP14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
SSX2IP-201ENST00000342203 TUBB4AP04350 444 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 HDXQ7Z353 690 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 MTX1Q13505 466 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 CEP112Q8N8E3 955 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 GYS2P54840 703 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 LONRF3Q496Y0 759 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 ANKRD65E5RJM6 399 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 HLTFQ14527 1009 aaKnown RBP eCLIP14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 SLC12A7Q9Y666 1083 aa14.35□□□□□ -0.11
SSX2IP-201ENST00000342203 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 DDIT3P35638 169 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ATRIPQ8WXE1 791 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 SAMD9Q5K651 1589 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ADKP55263 362 aaKnown RBP14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 TDRD7Q8NHU6 1098 aaKnown RBP14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 PAFAH1B1P43034 410 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 CLCN6P51797 869 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ERVK-7P63135 1459 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 TTC21BQ7Z4L5 1316 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ZNF202O95125 648 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 EYA1Q99502 592 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ZCCHC17Q9NP64 241 aaKnown RBP14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 SPTLC3Q9NUV7 552 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
SSX2IP-201ENST00000342203 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.11
SSX2IP-201ENST00000342203 MRFAP1L1Q96HT8 127 aa14.33□□□□□ -0.11
SSX2IP-201ENST00000342203 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 CEP57Q86XR8 500 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 KCNF1Q9H3M0 494 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 ZNF518AQ6AHZ1 1483 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 PRC1O43663 620 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 MCM3P25205 808 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 DHX58Q96C10 678 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 NAPBQ9H115 298 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 SSBP05455 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 SSRP1Q08945 709 aaKnown RBP14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 TMEM67Q5HYA8 995 aa14.33□□□□□ -0.12
SSX2IP-201ENST00000342203 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms