RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ANKRD24Q8TF21 1146 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 PTPDC1A2A3K4 754 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 ERICH4A6NGS2 130 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 STOX1Q6ZVD7 989 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 ORAI2Q96SN7 254 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 ALDH1L1O75891 902 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 RESTQ13127 1097 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 PTPN14Q15678 1187 aa18.93■□□□□ 0.62
SCARB1-202ENST00000339570 COL15A1P39059 1388 aa18.93■□□□□ 0.62
SCARB1-202ENST00000339570 EPB41L2O43491 1005 aaKnown RBP18.93■□□□□ 0.62
SCARB1-202ENST00000339570 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-202ENST00000339570 PLA2G4DQ86XP0 818 aa18.93■□□□□ 0.62
SCARB1-202ENST00000339570 ST7Q9NRC1 585 aa18.93■□□□□ 0.62
SCARB1-202ENST00000339570 FAM208AQ9UK61 1670 aaKnown RBP18.93■□□□□ 0.62
SCARB1-202ENST00000339570 A0A087WZG4 1122 aa18.92■□□□□ 0.62
SCARB1-202ENST00000339570 ELF2Q15723 593 aa18.92■□□□□ 0.62
SCARB1-202ENST00000339570 AXIN2Q9Y2T1 843 aa18.92■□□□□ 0.62
SCARB1-202ENST00000339570 ZNF594Q96JF6 807 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-202ENST00000339570 FKBP4Q02790 459 aaKnown RBP eCLIP18.92■□□□□ 0.62
SCARB1-202ENST00000339570 LRRC8AQ8IWT6 810 aa18.92■□□□□ 0.62
SCARB1-202ENST00000339570 CSB-PGBD3P0DP91 1061 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 TNNI3KQ59H18 835 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 CGNQ9P2M7 1197 aaKnown RBP18.91■□□□□ 0.62
SCARB1-202ENST00000339570 FPGT-TNNI3KV9GXZ4 949 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 GOLGA8FQ08AF8 430 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 GOLGA8DPQ0D2H9 430 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 CFAP45Q9UL16 551 aa18.91■□□□□ 0.62
SCARB1-202ENST00000339570 USP42Q9H9J4 1324 aaKnown RBP18.91■□□□□ 0.62
SCARB1-202ENST00000339570 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
SCARB1-202ENST00000339570 MTX1Q13505 466 aa18.9■□□□□ 0.62
SCARB1-202ENST00000339570 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
SCARB1-202ENST00000339570 GCKRQ14397 625 aa18.9■□□□□ 0.62
SCARB1-202ENST00000339570 LMBR1LQ6UX01 489 aa18.9■□□□□ 0.62
SCARB1-202ENST00000339570 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-202ENST00000339570 RXRAP19793 462 aa18.9■□□□□ 0.62
SCARB1-202ENST00000339570 ELP1O95163 1332 aa18.9■□□□□ 0.62
SCARB1-202ENST00000339570 GCP02774 474 aa18.89■□□□□ 0.62
SCARB1-202ENST00000339570 TMC6Q7Z403 805 aa18.89■□□□□ 0.62
SCARB1-202ENST00000339570 ANKRD7Q92527 254 aa18.89■□□□□ 0.62
SCARB1-202ENST00000339570 DDX17Q92841 729 aaKnown RBP18.89■□□□□ 0.62
SCARB1-202ENST00000339570 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.62
SCARB1-202ENST00000339570 TUBGCP6Q96RT7 1819 aa18.89■□□□□ 0.61
SCARB1-202ENST00000339570 WASHC4Q2M389 1173 aa18.89■□□□□ 0.61
SCARB1-202ENST00000339570 CEMIPQ8WUJ3 1361 aa18.89■□□□□ 0.61
SCARB1-202ENST00000339570 ZNF496Q96IT1 587 aaPredicted RBP18.89■□□□□ 0.61
SCARB1-202ENST00000339570 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
SCARB1-202ENST00000339570 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
SCARB1-202ENST00000339570 MARCKSP29966 332 aaPredicted RBP18.88■□□□□ 0.61
SCARB1-202ENST00000339570 STX1AQ16623 288 aa18.88■□□□□ 0.61
SCARB1-202ENST00000339570 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
SCARB1-202ENST00000339570 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
SCARB1-202ENST00000339570 HOMER1Q86YM7 354 aa18.88■□□□□ 0.61
SCARB1-202ENST00000339570 LMOD1P29536 600 aaPredicted RBP18.87■□□□□ 0.61
SCARB1-202ENST00000339570 IQCB1Q15051 598 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 STK38Q15208 465 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 PXDNQ92626 1479 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 NSUN7Q8NE18 718 aaKnown RBP18.87■□□□□ 0.61
SCARB1-202ENST00000339570 KCNB2Q92953 911 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 IFNKQ9P0W0 207 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 CTDNEP1O95476 244 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 LRRN4CLQ8ND94 238 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
SCARB1-202ENST00000339570 ZNF609O15014 1411 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 CTIFO43310 598 aaKnown RBP18.86■□□□□ 0.61
SCARB1-202ENST00000339570 PTPN12Q05209 780 aaKnown RBP18.86■□□□□ 0.61
SCARB1-202ENST00000339570 DPCR1Q3MIW9 517 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 HDAC5Q9UQL6 1122 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 PXDNLA1KZ92 1463 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 ZBTB22O15209 634 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 PDIA6Q15084 440 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 SYT10Q6XYQ8 523 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 CABLES1Q8TDN4 633 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 HMG20BQ9P0W2 317 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 DIP2BQ9P265 1576 aa18.86■□□□□ 0.61
SCARB1-202ENST00000339570 KRT32Q14532 448 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 CEP57L1Q8IYX8 460 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 TTC5Q8N0Z6 440 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 CTNNA3Q9UI47 895 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 CLIC4Q9Y696 253 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 FMN2Q9NZ56 1722 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 NDUFA8P51970 172 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 CHRNA2Q15822 529 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
SCARB1-202ENST00000339570 MED23Q9ULK4 1368 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 PIK3C2AO00443 1686 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 HOXB7P09629 217 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
SCARB1-202ENST00000339570 KMT5BQ4FZB7 885 aa18.84■□□□□ 0.61
SCARB1-202ENST00000339570 PCDHA7Q9UN72 937 aa18.84■□□□□ 0.61
SCARB1-202ENST00000339570 ERCC6LQ2NKX8 1250 aa18.84■□□□□ 0.61
SCARB1-202ENST00000339570 THEMISQ8N1K5 641 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-202ENST00000339570 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
SCARB1-202ENST00000339570 XPO4Q9C0E2 1151 aaKnown RBP18.84■□□□□ 0.61
SCARB1-202ENST00000339570 DHX32Q7L7V1 743 aaKnown RBP18.83■□□□□ 0.61
SCARB1-202ENST00000339570 ANO10Q9NW15 660 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms