RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 PODXL2Q9NZ53 605 aa23.16■■□□□ 1.3
HLA-F-217ENST00000334668 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-217ENST00000334668 ZKSCAN2Q63HK3 967 aa23.15■■□□□ 1.3
HLA-F-217ENST00000334668 SUPT20HQ8NEM7 779 aa23.15■■□□□ 1.3
HLA-F-217ENST00000334668 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-217ENST00000334668 TNNQ9UQP3 1299 aa23.15■■□□□ 1.3
HLA-F-217ENST00000334668 COL4A5P29400 1685 aa23.15■■□□□ 1.3
HLA-F-217ENST00000334668 GPSM2P81274 684 aa23.14■■□□□ 1.29
HLA-F-217ENST00000334668 BICC1Q9H694 974 aaKnown RBP23.13■■□□□ 1.29
HLA-F-217ENST00000334668 ANKRD18BA2A2Z9 1011 aa23.12■■□□□ 1.29
HLA-F-217ENST00000334668 GLTPD2A6NH11 291 aa23.12■■□□□ 1.29
HLA-F-217ENST00000334668 FZD9O00144 591 aa23.12■■□□□ 1.29
HLA-F-217ENST00000334668 IFIT5Q13325 482 aaKnown RBP23.12■■□□□ 1.29
HLA-F-217ENST00000334668 ANKRD44Q8N8A2 993 aa23.12■■□□□ 1.29
HLA-F-217ENST00000334668 POLLQ9UGP5 575 aa23.12■■□□□ 1.29
HLA-F-217ENST00000334668 MINPP1Q9UNW1 487 aa23.12■■□□□ 1.29
HLA-F-217ENST00000334668 NSFL1CQ9UNZ2 370 aaKnown RBP23.12■■□□□ 1.29
HLA-F-217ENST00000334668 IGHMBP2P38935 993 aaKnown RBP23.11■■□□□ 1.29
HLA-F-217ENST00000334668 KIAA2012Q0VF49 1180 aa23.11■■□□□ 1.29
HLA-F-217ENST00000334668 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
HLA-F-217ENST00000334668 GPBP1L1Q9HC44 474 aaPredicted RBP23.1■■□□□ 1.29
HLA-F-217ENST00000334668 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 AOC3Q16853 763 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 TBC1D16Q8TBP0 767 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 RCAN3Q9UKA8 241 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
HLA-F-217ENST00000334668 XDHP47989 1333 aa23.08■■□□□ 1.29
HLA-F-217ENST00000334668 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
HLA-F-217ENST00000334668 WDR90Q96KV7 1748 aa23.08■■□□□ 1.29
HLA-F-217ENST00000334668 UBTFL1P0CB47 393 aaPredicted RBP23.08■■□□□ 1.29
HLA-F-217ENST00000334668 ZNF526Q8TF50 670 aaPredicted RBP23.08■■□□□ 1.29
HLA-F-217ENST00000334668 JDP2Q8WYK2 163 aa23.08■■□□□ 1.29
HLA-F-217ENST00000334668 MPHOSPH8Q99549 860 aa23.08■■□□□ 1.29
HLA-F-217ENST00000334668 MEIS3Q99687 375 aa23.08■■□□□ 1.29
HLA-F-217ENST00000334668 DPY19L2Q6NUT2 758 aa23.07■■□□□ 1.28
HLA-F-217ENST00000334668 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
HLA-F-217ENST00000334668 GGA1Q9UJY5 639 aa23.07■■□□□ 1.28
HLA-F-217ENST00000334668 HDAC5Q9UQL6 1122 aa23.07■■□□□ 1.28
HLA-F-217ENST00000334668 RLBP1P12271 317 aa23.06■■□□□ 1.28
HLA-F-217ENST00000334668 WASHC4Q2M389 1173 aa23.06■■□□□ 1.28
HLA-F-217ENST00000334668 DZIP1LQ8IYY4 767 aaKnown RBP23.06■■□□□ 1.28
HLA-F-217ENST00000334668 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
HLA-F-217ENST00000334668 ZNF541Q9H0D2 1346 aa23.06■■□□□ 1.28
HLA-F-217ENST00000334668 C6orf229H3BNL8 230 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 UFL1O94874 794 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 GNAI3P08754 354 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 ATP2B4P23634 1241 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 ZNF594Q96JF6 807 aaPredicted RBP23.05■■□□□ 1.28
HLA-F-217ENST00000334668 EYA3Q99504 573 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 NMRK2Q9NPI5 230 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 SSUH2Q9Y2M2 353 aa23.05■■□□□ 1.28
HLA-F-217ENST00000334668 KIF3CO14782 793 aa23.04■■□□□ 1.28
HLA-F-217ENST00000334668 YTHDC1Q96MU7 727 aaKnown RBP23.04■■□□□ 1.28
HLA-F-217ENST00000334668 ANKRD2Q9GZV1 360 aa23.04■■□□□ 1.28
HLA-F-217ENST00000334668 DDNO94850 711 aaPredicted RBP23.03■■□□□ 1.28
HLA-F-217ENST00000334668 CHRNDQ07001 517 aa23.03■■□□□ 1.28
HLA-F-217ENST00000334668 FTSJ3Q8IY81 847 aaKnown RBP23.03■■□□□ 1.28
HLA-F-217ENST00000334668 L3MBTL3Q96JM7 780 aaPredicted RBP23.03■■□□□ 1.28
HLA-F-217ENST00000334668 ZNRF3Q9ULT6 936 aa23.03■■□□□ 1.28
HLA-F-217ENST00000334668 LEMD3Q9Y2U8 911 aa23.03■■□□□ 1.28
HLA-F-217ENST00000334668 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
HLA-F-217ENST00000334668 POTECB2RU33 542 aa23.02■■□□□ 1.28
HLA-F-217ENST00000334668 RFX5P48382 616 aaPredicted RBP23.02■■□□□ 1.28
HLA-F-217ENST00000334668 TAF7LQ5H9L4 462 aa23.02■■□□□ 1.28
HLA-F-217ENST00000334668 LDHAL6AQ6ZMR3 332 aa23.02■■□□□ 1.28
HLA-F-217ENST00000334668 PIP4P2Q8N4L2 257 aa23.02■■□□□ 1.28
HLA-F-217ENST00000334668 SCN4AP35499 1836 aa23.02■■□□□ 1.28
HLA-F-217ENST00000334668 SCN9AQ15858 1988 aa23.01■■□□□ 1.27
HLA-F-217ENST00000334668 WTIPA6NIX2 430 aaPredicted RBP23.01■■□□□ 1.27
HLA-F-217ENST00000334668 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
HLA-F-217ENST00000334668 GPC2Q8N158 579 aa23.01■■□□□ 1.27
HLA-F-217ENST00000334668 GPR101Q96P66 508 aaPredicted RBP23.01■■□□□ 1.27
HLA-F-217ENST00000334668 ZC3H12CQ9C0D7 883 aaKnown RBP23.01■■□□□ 1.27
HLA-F-217ENST00000334668 RIPOR2Q9Y4F9 1068 aa23.01■■□□□ 1.27
HLA-F-217ENST00000334668 YDJCA8MPS7 323 aa23■■□□□ 1.27
HLA-F-217ENST00000334668 PUS3Q9BZE2 481 aaKnown RBP23■■□□□ 1.27
HLA-F-217ENST00000334668 RRAGCQ9HB90 399 aa23■■□□□ 1.27
HLA-F-217ENST00000334668 MED23Q9ULK4 1368 aa23■■□□□ 1.27
HLA-F-217ENST00000334668 PSME4Q14997 1843 aa22.99■■□□□ 1.27
HLA-F-217ENST00000334668 RIMBP2O15034 1052 aa22.99■■□□□ 1.27
HLA-F-217ENST00000334668 MS4A1P11836 297 aa22.99■■□□□ 1.27
HLA-F-217ENST00000334668 CXCL9Q07325 125 aa22.99■■□□□ 1.27
HLA-F-217ENST00000334668 MTX1Q13505 466 aa22.99■■□□□ 1.27
HLA-F-217ENST00000334668 ZBTB7BO15156 539 aaPredicted RBP22.98■■□□□ 1.27
HLA-F-217ENST00000334668 VEGFAP15692 232 aaPredicted RBP22.98■■□□□ 1.27
HLA-F-217ENST00000334668 PTPN12Q05209 780 aaKnown RBP22.98■■□□□ 1.27
HLA-F-217ENST00000334668 CNNM1Q9NRU3 951 aa22.98■■□□□ 1.27
HLA-F-217ENST00000334668 ZNF804BA4D1E1 1349 aa22.98■■□□□ 1.27
HLA-F-217ENST00000334668 IRS2Q9Y4H2 1338 aa22.98■■□□□ 1.27
HLA-F-217ENST00000334668 GNAI2P04899 355 aa22.97■■□□□ 1.27
HLA-F-217ENST00000334668 C15orf52Q6ZUT6 534 aaKnown RBP22.97■■□□□ 1.27
HLA-F-217ENST00000334668 ITPRIPQ8IWB1 547 aa22.97■■□□□ 1.27
HLA-F-217ENST00000334668 HELBQ8NG08 1087 aaPredicted RBP22.97■■□□□ 1.27
HLA-F-217ENST00000334668 PANK1Q8TE04 598 aa22.97■■□□□ 1.27
HLA-F-217ENST00000334668 DBNDD1Q9H9R9 158 aa22.97■■□□□ 1.27
HLA-F-217ENST00000334668 ECE2O60344 883 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms