RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TBC1D31Q96DN5 1066 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 C10orf88Q9H8K7 445 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ERCC5P28715 1186 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ECE1P42892 770 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 HABP4Q5JVS0 413 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 METTL24Q5JXM2 366 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ACBD5Q5T8D3 534 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 CC2D1AQ6P1N0 951 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZFYVE27Q5T4F4 411 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 SH2D4AQ9H788 454 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 POGKQ9P215 609 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC30Q5VVM6 783 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 TSC22D4Q9Y3Q8 395 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 COMMD10Q9Y6G5 202 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 PRG4Q92954 1404 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 PPFIA1Q13136 1202 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 MIER1Q8N108 512 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 RRP36Q96EU6 259 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 QKIQ96PU8 341 aaKnown RBP eCLIP6.88□□□□□ -1.311e-11■■■■■ 59.5
CDC42BPA-201ENST00000334218 ZFYVE1Q9HBF4 777 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 TRPA1O75762 1119 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 LMAN1P49257 510 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 VPS41P49754 854 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 SAAL1Q96ER3 474 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 GUCY1B2O75343 617 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC159P0C7I6 412 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 MSR1P21757 451 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ERCC6LQ2NKX8 1250 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 MPRIPQ6WCQ1 1025 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 CROCCP2Q86T23 111 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 RAPGEF4Q8WZA2 1011 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 ST13P4Q8IZP2 240 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC150Q8NCX0 1101 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 YEATS4O95619 227 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 ANKRD1Q15327 319 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 CENPQQ7L2Z9 268 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 ST13P5Q8NFI4 369 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 XPO1O14980 1071 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 SART3Q15020 963 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 LRSAM1Q6UWE0 723 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 CACNA2D4Q7Z3S7 1137 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 PPP1R14BQ96C90 147 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 SPOCK3Q9BQ16 436 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 KIF4BQ2VIQ3 1234 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 NLRP9Q7RTR0 991 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 VPS37DQ86XT2 251 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 TNIP2Q8NFZ5 429 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 JAKMIP2Q96AA8 810 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 LRRFIP2Q9Y608 721 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 NCAPH2Q6IBW4 605 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 RNF10Q8N5U6 811 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 NRBF2Q96F24 287 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 MRFAP1Q9Y605 127 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 PEX14O75381 377 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 CTNNA1P35221 906 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 PLIN5Q00G26 463 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 PSMD2Q13200 908 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 ESCO1Q5FWF5 840 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 HAUS8Q9BT25 410 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 RAD54L2Q9Y4B4 1467 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.87□□□□□ -1.311e-7■□□□□ 10.9
CDC42BPA-201ENST00000334218 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 AFG3L2Q9Y4W6 797 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 SMIM23A6NLE4 172 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC192P0DO97 292 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 SCRN3Q0VDG4 424 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 HAUS1Q96CS2 278 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 STAC3Q96MF2 364 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 CTTNBP2NLQ9P2B4 639 aa6.87□□□□□ -1.31
CDC42BPA-201ENST00000334218 SYNJ1O43426 1573 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 P4HBP07237 508 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 PDCP20941 246 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 RMI1Q9H9A7 625 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 CITO14578 2027 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 HSP90AA4PQ58FG1 418 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 HELBQ8NG08 1087 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 TSC22D3Q99576 134 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 SMARCAD1Q9H4L7 1026 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 RRP7BPQ9NSQ0 103 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.86□□□□□ -1.312e-6■■■■■ 39.6
CDC42BPA-201ENST00000334218 DYTNA2CJ06 578 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 KIAA1524Q8TCG1 905 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZNF830Q96NB3 372 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 TRIM8Q9BZR9 551 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 GRPEL1Q9HAV7 217 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 STIM1Q13586 685 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 CPLX3Q8WVH0 158 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC138Q96M89 665 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 TUFT1Q9NNX1 390 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 POLA1P09884 1462 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 TMEM191CA6NGB0 347 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 PSMA7O14818 248 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 TMEM191BP0C7N4 346 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 RWDD2BP57060 319 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 MRPS35P82673 323 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms